Gm54944 Gene Detail

Summary

• Symbol
  Gm54944
• Name
  predicted gene, 54944

• Feature Type
  rRNA gene
• IDs
  MGI:6846363
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:27035126-27035207 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  150 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846363	rRNA gene	Chr11:27035126-27035207 (+)
129S1/SvImJ	ENSMUSG00200010172	rRNA gene	Chr11:24067888-24067969 (+)
A/J	ENSMUSG00195014610	rRNA gene	Chr11:23884922-23885003 (+)
AKR/J	ENSMUSG00220008352	rRNA gene	Chr11:24016502-24016583 (+)
BALB/cJ	ENSMUSG00180008150	rRNA gene	Chr11:23871197-23871278 (+)
C3H/HeJ	ENSMUSG00175016694	rRNA gene	Chr11:23888487-23888568 (+)
C57BL/6NJ	ENSMUSG00215010669	rRNA gene	Chr11:23976285-23976366 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030090	rRNA gene	Chr11:23805935-23806016 (+)
CBA/J	ENSMUSG00210009958	rRNA gene	Chr11:23898326-23898407 (+)
DBA/2J	ENSMUSG00185020006	rRNA gene	Chr11:23971247-23971328 (+)
FVB/NJ	ENSMUSG00205021384	rRNA gene	Chr11:23954460-23954541 (+)
JF1/MsJ	ENSUMUG00000011286	rRNA gene	Chr11:24211108-24211189 (+)
LP/J	ENSMUSG00230015574	rRNA gene	Chr11:25020873-25020954 (+)
NOD/ShiLtJ	ENSMUSG00190026320	rRNA gene	Chr11:24070211-24070292 (+)
NZO/HlLtJ	ENSMUSG00225022682	rRNA gene	Chr11:27056674-27056755 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005013313	rRNA gene	Chr11:23945615-23945696 (+)

Homology

• Gene Tree
  Gm54944
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002074890 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074890	Ensembl Gene Model | MGI Sequence Detail	82	C57BL/6J
transcript	ENSMUST00020183309	Ensembl | MGI Sequence Detail	82	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;