Gm54943 Gene Detail

Summary

• Symbol
  Gm54943
• Name
  predicted gene, 54943

• Feature Type
  miRNA gene
• IDs
  MGI:6846361
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:80968951-80969020 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  80 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846361	miRNA gene	Chr18:80968951-80969020 (-)
129S1/SvImJ	ENSMUSG00200029178	miRNA gene	Chr18:78173673-78173742 (-)
A/J	ENSMUSG00195004902	miRNA gene	Chr18:78265194-78265289 (-)
AKR/J	no annotation
BALB/cJ	ENSMUSG00180013882	miRNA gene	Chr18:78835479-78835574 (-)
C3H/HeJ	ENSMUSG00175013323	miRNA gene	Chr18:78386285-78386354 (-)
C57BL/6NJ	ENSMUSG00215030401	miRNA gene	Chr18:77748502-77748571 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029245	miRNA gene	Chr18:77291057-77291084 (-)
CBA/J	ENSMUSG00210036903	miRNA gene	Chr18:78336826-78336895 (-)
DBA/2J	ENSMUSG00185011392	miRNA gene	Chr18:78242093-78242162 (-)
FVB/NJ	ENSMUSG00205017403	miRNA gene	Chr18:77648386-77648455 (-)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230013957	miRNA gene	Chr18:80279933-80280002 (-)
NOD/ShiLtJ	ENSMUSG00190022681	miRNA gene	Chr18:78039093-78039188 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010009946	miRNA gene	Chr18:78893667-78893730 (-)
WSB/EiJ	ENSIUOG00005007978	miRNA gene	Chr18:77701876-77701945 (-)

Homology

• Gene Tree
  Gm54943
  

Sequences &
Gene Models

• All Sequences
  16

• Ensembl
  ENSMUSG00002075248 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075248	Ensembl Gene Model | MGI Sequence Detail	70	C57BL/6J
transcript	ENSMUST00020182019	Ensembl | MGI Sequence Detail	70	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;