Gm54942 Gene Detail

Summary

• Symbol
  Gm54942
• Name
  predicted gene, 54942

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846359
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:40751636-40751878 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  185 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846359	unclassified non-coding RNA gene	Chr10:40751636-40751878 (-)
129S1/SvImJ	ENSMUSG00200009399	unclassified non-coding RNA gene	Chr10:37633224-37633466 (-)
A/J	ENSMUSG00195018206	unclassified non-coding RNA gene	Chr10:37912670-37912912 (-)
AKR/J	ENSMUSG00220028000	unclassified non-coding RNA gene	Chr10:37589196-37589438 (-)
BALB/cJ	ENSMUSG00180017132	unclassified non-coding RNA gene	Chr10:37997897-37998139 (-)
C3H/HeJ	ENSMUSG00175012650	unclassified non-coding RNA gene	Chr10:37792116-37792358 (-)
C57BL/6NJ	ENSMUSG00215011343	unclassified non-coding RNA gene	Chr10:37542751-37542993 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028622	unclassified non-coding RNA gene	Chr10:38007475-38007717 (-)
CBA/J	ENSMUSG00210026134	unclassified non-coding RNA gene	Chr10:37685570-37685812 (-)
DBA/2J	ENSMUSG00185008004	unclassified non-coding RNA gene	Chr10:37838238-37838480 (-)
FVB/NJ	ENSMUSG00205014659	unclassified non-coding RNA gene	Chr10:37752854-37753096 (-)
JF1/MsJ	ENSUMUG00000034197	unclassified non-coding RNA gene	Chr10:37632636-37632676 (-)
LP/J	ENSMUSG00230016718	unclassified non-coding RNA gene	Chr10:39623141-39623383 (-)
NOD/ShiLtJ	ENSMUSG00190036393	unclassified non-coding RNA gene	Chr10:37966420-37966662 (-)
NZO/HlLtJ	ENSMUSG00225018003	unclassified non-coding RNA gene	Chr10:43931266-43931508 (-)
PWK/PhJ	ENSLUMG00010008165	unclassified non-coding RNA gene	Chr10:37756559-37756803 (-)
SPRET/EiJ	ENSMSPG00010022004	unclassified non-coding RNA gene	Chr10:38778762-38779006 (-)
WSB/EiJ	ENSIUOG00005015653	unclassified non-coding RNA gene	Chr10:37535039-37535281 (-)

Homology

• Gene Tree
  Gm54942
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076954 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076954	Ensembl Gene Model | MGI Sequence Detail	243	C57BL/6J
transcript	ENSMUST00020183531	Ensembl | MGI Sequence Detail	243	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;