Gm54940 Gene Detail

Summary

• Symbol
  Gm54940
• Name
  predicted gene, 54940

• Feature Type
  miRNA gene
• IDs
  MGI:6846355
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:14400178-14400285 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  158 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846355	miRNA gene	Chr8:14400178-14400285 (+)
129S1/SvImJ	ENSMUSG00200033900	miRNA gene	Chr8:11308369-11308476 (+)
A/J	ENSMUSG00195043914	miRNA gene	Chr8:11653639-11653746 (+)
AKR/J	ENSMUSG00220033869	miRNA gene	Chr8:11359344-11359451 (+)
BALB/cJ	ENSMUSG00180026650	miRNA gene	Chr8:11269191-11269298 (+)
C3H/HeJ	ENSMUSG00175042142	miRNA gene	Chr8:11452503-11452610 (+)
C57BL/6NJ	ENSMUSG00215032962	miRNA gene	Chr8:11326883-11326990 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019861	miRNA gene	Chr8:11267734-11267841 (+)
CBA/J	ENSMUSG00210044169	miRNA gene	Chr8:11286314-11286421 (+)
DBA/2J	ENSMUSG00185007056	miRNA gene	Chr8:11419077-11419184 (+)
FVB/NJ	ENSMUSG00205035958	miRNA gene	Chr8:11310098-11310205 (+)
JF1/MsJ	ENSUMUG00000033907	miRNA gene	Chr8:11420076-11420183 (+)
LP/J	ENSMUSG00230024382	miRNA gene	Chr8:13578302-13578409 (+)
NOD/ShiLtJ	ENSMUSG00190041244	miRNA gene	Chr8:11416676-11416783 (+)
NZO/HlLtJ	ENSMUSG00225042660	miRNA gene	Chr8:21463595-21463702 (+)
PWK/PhJ	ENSLUMG00010031490	miRNA gene	Chr8:11335916-11336023 (+)
SPRET/EiJ	ENSMSPG00010014715	miRNA gene	Chr8:11485053-11485158 (+)
WSB/EiJ	ENSIUOG00005021882	miRNA gene	Chr8:11288025-11288132 (+)

Homology

• Gene Tree
  Gm54940
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076625 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076625	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020182552	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;