Gm54933 Gene Detail

Summary

• Symbol
  Gm54933
• Name
  predicted gene, 54933

• Feature Type
  rRNA gene
• IDs
  MGI:6846341
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:98164086-98164192 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  97 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846341	rRNA gene	Chr11:98164086-98164192 (-)
129S1/SvImJ	ENSMUSG00200053174	rRNA gene	Chr11:95412556-95412662 (-)
A/J	ENSMUSG00195052694	rRNA gene	Chr11:95134126-95134232 (-)
AKR/J	ENSMUSG00220051700	rRNA gene	Chr11:95393234-95393340 (-)
BALB/cJ	ENSMUSG00180052315	rRNA gene	Chr11:95405925-95406031 (-)
C3H/HeJ	ENSMUSG00175052870	rRNA gene	Chr11:95392626-95392732 (-)
C57BL/6NJ	ENSMUSG00215054363	rRNA gene	Chr11:94982207-94982313 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050678	rRNA gene	Chr11:94844984-94845090 (-)
CBA/J	ENSMUSG00210053476	rRNA gene	Chr11:95096176-95096282 (-)
DBA/2J	ENSMUSG00185052728	rRNA gene	Chr11:95442511-95442617 (-)
FVB/NJ	ENSMUSG00205049871	rRNA gene	Chr11:95309429-95309535 (-)
JF1/MsJ	ENSUMUG00000055803	rRNA gene	Chr11:95747937-95748043 (-)
LP/J	ENSMUSG00230051220	rRNA gene	Chr11:96495433-96495539 (-)
NOD/ShiLtJ	ENSMUSG00190053161	rRNA gene	Chr11:95483906-95484012 (-)
NZO/HlLtJ	ENSMUSG00225052977	rRNA gene	Chr11:98547492-98547598 (-)
PWK/PhJ	ENSLUMG00010052339	rRNA gene	Chr11:95300047-95300153 (-)
SPRET/EiJ	ENSMSPG00010051367	rRNA gene	Chr11:95792430-95792536 (-)
WSB/EiJ	ENSIUOG00005051037	rRNA gene	Chr11:95248576-95248682 (-)

Homology

• Gene Tree
  Gm54933
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074991 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074991	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182802	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;