Gm54931 Gene Detail

Summary

• Symbol
  Gm54931
• Name
  predicted gene, 54931

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846337
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:139542709-139543010 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846337	unclassified non-coding RNA gene	ChrX:139542709-139543010 (-)
129S1/SvImJ	ENSMUSG00200047614	unclassified non-coding RNA gene	ChrX:118552002-118552303 (-)
A/J	ENSMUSG00195048334	unclassified non-coding RNA gene	ChrX:122411070-122411371 (-)
AKR/J	ENSMUSG00220038217	unclassified non-coding RNA gene	ChrX:115862906-115863207 (-)
BALB/cJ	ENSMUSG00180039272	unclassified non-coding RNA gene	ChrX:118843787-118844088 (-)
C3H/HeJ	ENSMUSG00175035093	unclassified non-coding RNA gene	ChrX:122707185-122707486 (-)
C57BL/6NJ	ENSMUSG00215044921	unclassified non-coding RNA gene	ChrX:119251314-119251615 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005040847	unclassified non-coding RNA gene	ChrX:119906187-119906488 (-)
CBA/J	ENSMUSG00210043434	unclassified non-coding RNA gene	ChrX:119634825-119635126 (-)
DBA/2J	ENSMUSG00185033496	unclassified non-coding RNA gene	ChrX:133525754-133526055 (-)
FVB/NJ	ENSMUSG00205036764	unclassified non-coding RNA gene	ChrX:118038152-118038453 (-)
JF1/MsJ	ENSUMUG00000032160	unclassified non-coding RNA gene	ChrX:152795762-152796062 (-)
LP/J	ENSMUSG00230040058	unclassified non-coding RNA gene	ChrX:140152924-140153225 (-)
NOD/ShiLtJ	ENSMUSG00190041879	unclassified non-coding RNA gene	ChrX:119047711-119048012 (-)
NZO/HlLtJ	ENSMUSG00225042873	unclassified non-coding RNA gene	ChrX:144844522-144844823 (-)
PWK/PhJ	ENSLUMG00010043745	unclassified non-coding RNA gene	ChrX:117537857-117538157 (-)
SPRET/EiJ	ENSMSPG00010039963	unclassified non-coding RNA gene	ChrX:122114631-122114939 (-)
WSB/EiJ	ENSIUOG00005039801	unclassified non-coding RNA gene	ChrX:119711576-119711877 (-)

Homology

• Gene Tree
  Gm54931
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076100 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076100	Ensembl Gene Model | MGI Sequence Detail	302	C57BL/6J
transcript	ENSMUST00020183190	Ensembl | MGI Sequence Detail	302	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm54931:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr164257	ChrX:139543008-139543010 (-)	1 bp