Gm54926 Gene Detail

Summary

• Symbol
  Gm54926
• Name
  predicted gene, 54926

• Feature Type
  snoRNA gene
• IDs
  MGI:6846327
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:51132470-51132586 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846327	snoRNA gene	Chr12:51132470-51132586 (+)
129S1/SvImJ	ENSMUSG00200032086	snoRNA gene	Chr12:43068679-43068795 (+)
A/J	ENSMUSG00195018405	snoRNA gene	Chr12:45654534-45654650 (+)
AKR/J	ENSMUSG00220027032	snoRNA gene	Chr12:43692891-43693007 (+)
BALB/cJ	ENSMUSG00180006183	snoRNA gene	Chr12:44646318-44646434 (+)
C3H/HeJ	ENSMUSG00175012094	snoRNA gene	Chr12:47716939-47717055 (+)
C57BL/6NJ	ENSMUSG00215015364	snoRNA gene	Chr12:44047474-44047590 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009392	snoRNA gene	Chr12:44238171-44238287 (+)
CBA/J	ENSMUSG00210010117	snoRNA gene	Chr12:44191345-44191461 (+)
DBA/2J	ENSMUSG00185014930	snoRNA gene	Chr12:46165216-46165332 (+)
FVB/NJ	ENSMUSG00205014890	snoRNA gene	Chr12:43987567-43987683 (+)
JF1/MsJ	ENSUMUG00000003621	snoRNA gene	Chr12:50296168-50296284 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190016454	snoRNA gene	Chr12:43188142-43188258 (+)
NZO/HlLtJ	ENSMUSG00225041150	snoRNA gene	Chr12:55334410-55334526 (+)
PWK/PhJ	ENSLUMG00010016549	snoRNA gene	Chr12:44390518-44390634 (+)
SPRET/EiJ	ENSMSPG00010016107	snoRNA gene	Chr12:45699734-45699850 (+)
WSB/EiJ	ENSIUOG00005003882	snoRNA gene	Chr12:43999261-43999377 (+)

Homology

• Gene Tree
  Gm54926
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076018 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076018	Ensembl Gene Model | MGI Sequence Detail	117	C57BL/6J
transcript	ENSMUST00020183510	Ensembl | MGI Sequence Detail	117	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;