Gm54923 Gene Detail

Summary

• Symbol
  Gm54923
• Name
  predicted gene, 54923

• Feature Type
  miRNA gene
• IDs
  MGI:6846321
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:75499453-75499555 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846321	miRNA gene	Chr14:75499453-75499555 (+)
129S1/SvImJ	ENSMUSG00200011143	miRNA gene	Chr14:63923968-63924070 (+)
A/J	ENSMUSG00195004137	miRNA gene	Chr14:64076199-64076301 (+)
AKR/J	ENSMUSG00220007435	miRNA gene	Chr14:63463751-63463853 (+)
BALB/cJ	ENSMUSG00180023960	miRNA gene	Chr14:63668234-63668336 (+)
C3H/HeJ	ENSMUSG00175031358	miRNA gene	Chr14:65484721-65484823 (+)
C57BL/6NJ	ENSMUSG00215019909	miRNA gene	Chr14:63663521-63663623 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005032633	miRNA gene	Chr14:65314361-65314462 (+)
CBA/J	ENSMUSG00210010262	miRNA gene	Chr14:64099623-64099725 (+)
DBA/2J	ENSMUSG00185024295	miRNA gene	Chr14:69244192-69244294 (+)
FVB/NJ	ENSMUSG00205028564	miRNA gene	Chr14:63491779-63491881 (+)
JF1/MsJ	ENSUMUG00000046328	miRNA gene	Chr14:80407933-80408035 (+)
LP/J	ENSMUSG00230017557	miRNA gene	Chr14:81274019-81274121 (+)
NOD/ShiLtJ	ENSMUSG00190011325	miRNA gene	Chr14:63874669-63874771 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010011292	miRNA gene	Chr14:63273114-63273216 (+)
SPRET/EiJ	ENSMSPG00010027585	miRNA gene	Chr14:66901341-66901443 (+)
WSB/EiJ	ENSIUOG00005023339	miRNA gene	Chr14:63245876-63245978 (+)

Homology

• Gene Tree
  Gm54923
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076433 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076433	Ensembl Gene Model | MGI Sequence Detail	103	C57BL/6J
transcript	ENSMUST00020182527	Ensembl | MGI Sequence Detail	103	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm54923:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr126668	Chr14:75498134-75498175 (+)	-1,298 bp