Gm54917 Gene Detail

Summary

• Symbol
  Gm54917
• Name
  predicted gene, 54917

• Feature Type
  miRNA gene
• IDs
  MGI:6846309
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:4007119-4007242 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846309	miRNA gene	Chr13:4007119-4007242 (-)
129S1/SvImJ	ENSMUSG00200006394	miRNA gene	Chr13:1189024-1189147 (-)
A/J	ENSMUSG00195012657	miRNA gene	Chr13:597195-597318 (-)
AKR/J	ENSMUSG00220013548	miRNA gene	Chr13:878141-878264 (-)
BALB/cJ	ENSMUSG00180009702	miRNA gene	Chr13:1009386-1009509 (-)
C3H/HeJ	ENSMUSG00175008592	miRNA gene	Chr13:1029110-1029233 (-)
C57BL/6NJ	ENSMUSG00215025624	miRNA gene	Chr13:1248932-1249055 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005024731	miRNA gene	Chr13:1252111-1252234 (-)
CBA/J	ENSMUSG00210023132	miRNA gene	Chr13:567812-567935 (-)
DBA/2J	ENSMUSG00185024900	miRNA gene	Chr13:1255543-1255666 (-)
FVB/NJ	ENSMUSG00205022189	miRNA gene	Chr13:1011041-1011164 (-)
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190013630	miRNA gene	Chr13:715395-715518 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021950	miRNA gene	Chr13:603150-603273 (-)

Homology

• Gene Tree
  Gm54917
  

Sequences &
Gene Models

• All Sequences
  15

• Ensembl
  ENSMUSG00002075714 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075714	Ensembl Gene Model | MGI Sequence Detail	124	C57BL/6J
transcript	ENSMUST00020183330	Ensembl | MGI Sequence Detail	124	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;