Gm54916 Gene Detail

Summary

• Symbol
  Gm54916
• Name
  predicted gene, 54916

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846307
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:46879342-46879590 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846307	unclassified non-coding RNA gene	Chr12:46879342-46879590 (-)
129S1/SvImJ	ENSMUSG00200011845	unclassified non-coding RNA gene	Chr12:38809569-38809816 (-)
A/J	ENSMUSG00195019057	unclassified non-coding RNA gene	Chr12:41397242-41397490 (-)
AKR/J	ENSMUSG00220005214	unclassified non-coding RNA gene	Chr12:39409842-39410090 (-)
BALB/cJ	ENSMUSG00180006246	unclassified non-coding RNA gene	Chr12:40384235-40384483 (-)
C3H/HeJ	ENSMUSG00175012017	unclassified non-coding RNA gene	Chr12:43451689-43451937 (-)
C57BL/6NJ	ENSMUSG00215012886	unclassified non-coding RNA gene	Chr12:39822376-39822624 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003685	unclassified non-coding RNA gene	Chr12:40079301-40079549 (-)
CBA/J	ENSMUSG00210016334	unclassified non-coding RNA gene	Chr12:39926237-39926485 (-)
DBA/2J	ENSMUSG00185015086	unclassified non-coding RNA gene	Chr12:41919491-41919738 (-)
FVB/NJ	ENSMUSG00205001424	unclassified non-coding RNA gene	Chr12:39773625-39773872 (-)
JF1/MsJ	ENSUMUG00000003850	unclassified non-coding RNA gene	Chr12:46090782-46091030 (-)
LP/J	ENSMUSG00230010876	unclassified non-coding RNA gene	Chr12:48950415-48950662 (-)
NOD/ShiLtJ	ENSMUSG00190003654	unclassified non-coding RNA gene	Chr12:38930443-38930690 (-)
NZO/HlLtJ	ENSMUSG00225031281	unclassified non-coding RNA gene	Chr12:51090929-51091176 (-)
PWK/PhJ	ENSLUMG00010013006	unclassified non-coding RNA gene	Chr12:40172820-40173068 (-)
SPRET/EiJ	ENSMSPG00010016054	unclassified non-coding RNA gene	Chr12:41339313-41339561 (-)
WSB/EiJ	ENSIUOG00005001458	unclassified non-coding RNA gene	Chr12:39739788-39740036 (-)

Homology

• Gene Tree
  Gm54916
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076225 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076225	Ensembl Gene Model | MGI Sequence Detail	249	C57BL/6J
transcript	ENSMUST00020183650	Ensembl | MGI Sequence Detail	249	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;