Gm54914 Gene Detail

Summary

• Symbol
  Gm54914
• Name
  predicted gene, 54914

• Feature Type
  rRNA gene
• IDs
  MGI:6846303
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:45406482-45406565 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  67 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846303	rRNA gene	Chr12:45406482-45406565 (+)
129S1/SvImJ	ENSMUSG00200012082	rRNA gene	Chr12:37319363-37319446 (+)
A/J	ENSMUSG00195019467	rRNA gene	Chr12:39909726-39909809 (+)
AKR/J	ENSMUSG00220005159	rRNA gene	Chr12:37927382-37927465 (+)
BALB/cJ	ENSMUSG00180003707	rRNA gene	Chr12:38896736-38896819 (+)
C3H/HeJ	ENSMUSG00175012172	rRNA gene	Chr12:41964283-41964366 (+)
C57BL/6NJ	ENSMUSG00215012647	rRNA gene	Chr12:38347235-38347318 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005003790	rRNA gene	Chr12:38647266-38647349 (+)
CBA/J	ENSMUSG00210016308	rRNA gene	Chr12:38438907-38438990 (+)
DBA/2J	ENSMUSG00185015364	rRNA gene	Chr12:40429306-40429389 (+)
FVB/NJ	ENSMUSG00205001604	rRNA gene	Chr12:38298641-38298724 (+)
JF1/MsJ	ENSUMUG00000003779	rRNA gene	Chr12:44619307-44619390 (+)
LP/J	ENSMUSG00230010795	rRNA gene	Chr12:47460323-47460406 (+)
NOD/ShiLtJ	ENSMUSG00190003728	rRNA gene	Chr12:37432058-37432141 (+)
NZO/HlLtJ	ENSMUSG00225031752	rRNA gene	Chr12:49626686-49626769 (+)
PWK/PhJ	ENSLUMG00010012926	rRNA gene	Chr12:38712172-38712255 (+)
SPRET/EiJ	ENSMSPG00010001968	rRNA gene	Chr12:39858813-39858896 (+)
WSB/EiJ	ENSIUOG00005001516	rRNA gene	Chr12:38251855-38251938 (+)

Homology

• Gene Tree
  Gm54914
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076117 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076117	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00020183535	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;