Gm54912 Gene Detail

Summary

• Symbol
  Gm54912
• Name
  predicted gene, 54912

• Feature Type
  snoRNA gene
• IDs
  MGI:6846299
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:10991894-10991984 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  66 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846299	snoRNA gene	Chr1:10991894-10991984 (+)
129S1/SvImJ	ENSMUSG00200003207	snoRNA gene	Chr1:8330815-8330905 (+)
A/J	ENSMUSG00195003210	snoRNA gene	Chr1:8162623-8162713 (+)
AKR/J	ENSMUSG00220004350	snoRNA gene	Chr1:8232809-8232899 (+)
BALB/cJ	ENSMUSG00180009434	snoRNA gene	Chr1:8228742-8228832 (+)
C3H/HeJ	ENSMUSG00175000496	snoRNA gene	Chr1:8126454-8126544 (+)
C57BL/6NJ	ENSMUSG00215004271	snoRNA gene	Chr1:8178701-8178791 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	ENSMUSG00210002151	snoRNA gene	Chr1:7990459-7990549 (+)
DBA/2J	ENSMUSG00185004744	snoRNA gene	Chr1:9058086-9058176 (+)
FVB/NJ	ENSMUSG00205005653	snoRNA gene	Chr1:8310000-8310090 (+)
JF1/MsJ	ENSUMUG00000012178	snoRNA gene	Chr7:60892999-60893128 (+)
JF1/MsJ	ENSUMUG00000004555	snoRNA gene	Chr1:8338133-8338223 (+)
LP/J	ENSMUSG00230002514	snoRNA gene	Chr1:9072126-9072216 (+)
NOD/ShiLtJ	ENSMUSG00190001507	snoRNA gene	Chr1:8129060-8129150 (+)
NZO/HlLtJ	ENSMUSG00225005692	snoRNA gene	Chr1:12462995-12463085 (+)
PWK/PhJ	ENSLUMG00010002556	snoRNA gene	Chr1:7940904-7940994 (+)
SPRET/EiJ	ENSMSPG00010014705	snoRNA gene	Chr1:8608806-8608896 (+)
WSB/EiJ	ENSIUOG00005011736	snoRNA gene	Chr1:8137006-8137096 (+)

Homology

• Gene Tree
  Gm54912
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076499 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076499	Ensembl Gene Model | MGI Sequence Detail	91	C57BL/6J
transcript	ENSMUST00020182331	Ensembl | MGI Sequence Detail	91	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;