Gm54911 Gene Detail

Summary

• Symbol
  Gm54911
• Name
  predicted gene, 54911

• Feature Type
  miRNA gene
• IDs
  MGI:6846297
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:4904314-4904423 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  102 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846297	miRNA gene	Chr5:4904314-4904423 (-)
129S1/SvImJ	ENSMUSG00200002778	miRNA gene	Chr5:1550933-1551036 (-)
A/J	ENSMUSG00195012549	miRNA gene	Chr5:1583044-1583153 (-)
AKR/J	ENSMUSG00220002325	miRNA gene	Chr5:1502381-1502490 (-)
BALB/cJ	ENSMUSG00180017148	miRNA gene	Chr5:1369649-1369752 (-)
C3H/HeJ	ENSMUSG00175030508	miRNA gene	Chr5:1519867-1519976 (-)
C57BL/6NJ	ENSMUSG00215027936	miRNA gene	Chr5:1815400-1815509 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001735	miRNA gene	Chr5:1718517-1718644 (-)
CBA/J	ENSMUSG00210002749	miRNA gene	Chr5:1884393-1884502 (-)
DBA/2J	ENSMUSG00185030703	miRNA gene	Chr5:1888173-1888282 (-)
FVB/NJ	ENSMUSG00205008167	miRNA gene	Chr5:1596461-1596572 (-)
JF1/MsJ	ENSUMUG00000004725	miRNA gene	Chr5:1895344-1895469 (-)
LP/J	ENSMUSG00230003668	miRNA gene	Chr5:5801460-5801563 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	ENSMUSG00225006708	miRNA gene	Chr5:9582223-9582332 (-)
PWK/PhJ	ENSLUMG00010019906	miRNA gene	Chr5:1852335-1852454 (-)
SPRET/EiJ	ENSMSPG00010005143	miRNA gene	Chr5:1710954-1711055 (-)
WSB/EiJ	ENSIUOG00005027604	miRNA gene	Chr5:1583439-1583558 (-)

Homology

• Gene Tree
  Gm54911
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002076622 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076622	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020181836	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;