Gm54906 Gene Detail

Summary

• Symbol
  Gm54906
• Name
  predicted gene, 54906

• Feature Type
  miRNA gene
• IDs
  MGI:6846287
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr8:84656072-84656185 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  37 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846287	miRNA gene	Chr8:84656072-84656185 (-)
129S1/SvImJ	ENSMUSG00200025701	miRNA gene	Chr8:79030791-79030904 (-)
A/J	ENSMUSG00195019865	miRNA gene	Chr8:79383901-79384014 (-)
AKR/J	ENSMUSG00220023891	miRNA gene	Chr8:79430179-79430292 (-)
BALB/cJ	ENSMUSG00180021555	miRNA gene	Chr8:79229316-79229429 (-)
C3H/HeJ	ENSMUSG00175011921	miRNA gene	Chr8:79314771-79314884 (-)
C57BL/6NJ	ENSMUSG00215028682	miRNA gene	Chr8:78951023-78951136 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037847	miRNA gene	Chr8:78837832-78837945 (-)
CBA/J	ENSMUSG00210020425	miRNA gene	Chr8:79307105-79307218 (-)
DBA/2J	ENSMUSG00185038676	miRNA gene	Chr8:85415904-85416017 (-)
FVB/NJ	ENSMUSG00205039237	miRNA gene	Chr8:78362343-78362456 (-)
JF1/MsJ	ENSUMUG00000037439	miRNA gene	Chr8:87717088-87717201 (-)
LP/J	ENSMUSG00230030348	miRNA gene	Chr8:89027738-89027851 (-)
NOD/ShiLtJ	ENSMUSG00190032056	miRNA gene	Chr8:79384186-79384299 (-)
NZO/HlLtJ	ENSMUSG00225040779	miRNA gene	Chr8:92412058-92412171 (-)
PWK/PhJ	ENSLUMG00010029532	miRNA gene	Chr8:79064035-79064148 (-)
SPRET/EiJ	ENSMSPG00010023854	miRNA gene	Chr8:80979218-80979331 (-)
WSB/EiJ	ENSIUOG00005016492	miRNA gene	Chr8:80123953-80124066 (-)

Homology

• Gene Tree
  Gm54906
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075713 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075713	Ensembl Gene Model | MGI Sequence Detail	114	C57BL/6J
transcript	ENSMUST00020182985	Ensembl | MGI Sequence Detail	114	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;