Gm54900 Gene Detail

Summary

• Symbol
  Gm54900
• Name
  predicted gene, 54900

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846275
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:8659199-8659527 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  108 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846275	unclassified non-coding RNA gene	Chr19:8659199-8659527 (-)
129S1/SvImJ	ENSMUSG00200053073	unclassified non-coding RNA gene	Chr19:5384922-5385250 (-)
A/J	ENSMUSG00195053865	unclassified non-coding RNA gene	Chr19:5786412-5786740 (-)
AKR/J	ENSMUSG00220051741	unclassified non-coding RNA gene	Chr19:5559674-5560002 (-)
BALB/cJ	ENSMUSG00180052138	unclassified non-coding RNA gene	Chr19:6150400-6150728 (-)
C3H/HeJ	ENSMUSG00175014594	unclassified non-coding RNA gene	Chr19:5424167-5424495 (-)
C57BL/6NJ	ENSMUSG00215047585	unclassified non-coding RNA gene	Chr19:5625356-5625684 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044221	unclassified non-coding RNA gene	Chr19:5262121-5262449 (-)
CBA/J	ENSMUSG00210050279	unclassified non-coding RNA gene	Chr19:5440971-5441300 (-)
DBA/2J	ENSMUSG00185052591	unclassified non-coding RNA gene	Chr19:5795656-5795985 (-)
FVB/NJ	ENSMUSG00205052576	unclassified non-coding RNA gene	Chr19:5482336-5482664 (-)
JF1/MsJ	ENSUMUG00000056880	unclassified non-coding RNA gene	Chr19:6032201-6032528 (-)
LP/J	ENSMUSG00230054346	unclassified non-coding RNA gene	Chr19:6711588-6711916 (-)
NOD/ShiLtJ	ENSMUSG00190052895	unclassified non-coding RNA gene	Chr19:5319994-5320322 (-)
NZO/HlLtJ	ENSMUSG00225046669	unclassified non-coding RNA gene	Chr19:10420383-10420711 (-)
PWK/PhJ	ENSLUMG00010008803	unclassified non-coding RNA gene	Chr19:5465404-5465730 (-)
SPRET/EiJ	ENSMSPG00010051077	unclassified non-coding RNA gene	Chr19:5372687-5373012 (-)
WSB/EiJ	ENSIUOG00005051409	unclassified non-coding RNA gene	Chr19:5148875-5149221 (-)

Homology

• Gene Tree
  Gm54900
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075107 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075107	Ensembl Gene Model | MGI Sequence Detail	329	C57BL/6J
transcript	ENSMUST00020181730	Ensembl | MGI Sequence Detail	329	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;