Gm54899 Gene Detail

Summary

• Symbol
  Gm54899
• Name
  predicted gene, 54899

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846273
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:10236764-10237003 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846273	unclassified non-coding RNA gene	Chr1:10236764-10237003 (+)
129S1/SvImJ	ENSMUSG00200002957	unclassified non-coding RNA gene	Chr1:7561119-7561358 (+)
A/J	ENSMUSG00195003172	unclassified non-coding RNA gene	Chr1:7378866-7379105 (+)
AKR/J	ENSMUSG00220004106	unclassified non-coding RNA gene	Chr1:7479235-7479474 (+)
BALB/cJ	ENSMUSG00180009218	unclassified non-coding RNA gene	Chr1:7462391-7462630 (+)
C3H/HeJ	ENSMUSG00175000396	unclassified non-coding RNA gene	Chr1:7359178-7359417 (+)
C57BL/6NJ	ENSMUSG00215004211	unclassified non-coding RNA gene	Chr1:7421183-7421422 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005002195	unclassified non-coding RNA gene	Chr1:7798535-7798774 (+)
CBA/J	ENSMUSG00210001902	unclassified non-coding RNA gene	Chr1:7218646-7218885 (+)
DBA/2J	ENSMUSG00185004653	unclassified non-coding RNA gene	Chr1:8306793-8307032 (+)
FVB/NJ	ENSMUSG00205005617	unclassified non-coding RNA gene	Chr1:7556233-7556472 (+)
JF1/MsJ	ENSUMUG00000004487	unclassified non-coding RNA gene	Chr1:7590042-7590281 (+)
LP/J	ENSMUSG00230002621	unclassified non-coding RNA gene	Chr1:8302816-8303055 (+)
NOD/ShiLtJ	ENSMUSG00190001456	unclassified non-coding RNA gene	Chr1:7370698-7370937 (+)
NZO/HlLtJ	ENSMUSG00225005891	unclassified non-coding RNA gene	Chr1:11704791-11705030 (+)
PWK/PhJ	ENSLUMG00010002450	unclassified non-coding RNA gene	Chr1:7196117-7196356 (+)
SPRET/EiJ	ENSMSPG00010014595	unclassified non-coding RNA gene	Chr1:7798520-7798759 (+)
WSB/EiJ	ENSIUOG00005011455	unclassified non-coding RNA gene	Chr1:7385561-7385800 (+)

Homology

• Gene Tree
  Gm54899
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076532 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076532	Ensembl Gene Model | MGI Sequence Detail	240	C57BL/6J
transcript	ENSMUST00020183640	Ensembl | MGI Sequence Detail	240	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;