Gm54898 Gene Detail

Summary

• Symbol
  Gm54898
• Name
  predicted gene, 54898

• Feature Type
  miRNA gene
• IDs
  MGI:6846271
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:64628521-64628610 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846271	miRNA gene	Chr17:64628521-64628610 (-)
129S1/SvImJ	ENSMUSG00200016853	miRNA gene	Chr17:59976823-59976912 (-)
A/J	ENSMUSG00195018999	miRNA gene	Chr17:61305767-61305856 (-)
AKR/J	ENSMUSG00220013542	miRNA gene	Chr17:60386625-60386714 (-)
BALB/cJ	ENSMUSG00180022101	miRNA gene	Chr17:61049685-61049774 (-)
C3H/HeJ	ENSMUSG00175007740	miRNA gene	Chr17:60366567-60366656 (-)
C57BL/6NJ	ENSMUSG00215009567	miRNA gene	Chr17:60015640-60015729 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005027961	miRNA gene	Chr17:60989296-60989387 (-)
CBA/J	ENSMUSG00210029185	miRNA gene	Chr17:60158860-60158949 (-)
DBA/2J	ENSMUSG00185023577	miRNA gene	Chr17:62999725-62999816 (-)
FVB/NJ	ENSMUSG00205007412	miRNA gene	Chr17:60640245-60640334 (-)
JF1/MsJ	ENSUMUG00000042193	miRNA gene	Chr17:62664261-62664331 (-)
LP/J	ENSMUSG00230017806	miRNA gene	Chr17:63988706-63988795 (-)
NOD/ShiLtJ	ENSMUSG00190010778	miRNA gene	Chr17:60136152-60136243 (-)
NZO/HlLtJ	ENSMUSG00225026487	miRNA gene	Chr17:66255640-66255729 (-)
PWK/PhJ	ENSLUMG00010009532	miRNA gene	Chr17:59932532-59932604 (-)
SPRET/EiJ	ENSMSPG00010006125	miRNA gene	Chr17:60313583-60313672 (-)
WSB/EiJ	ENSIUOG00005033896	miRNA gene	Chr17:60984548-60984645 (-)

Homology

• Gene Tree
  Gm54898
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076004 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076004	Ensembl Gene Model | MGI Sequence Detail	90	C57BL/6J
transcript	ENSMUST00020183680	Ensembl | MGI Sequence Detail	90	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;