Gm54896 Gene Detail

Summary

• Symbol
  Gm54896
• Name
  predicted gene, 54896

• Feature Type
  rRNA gene
• IDs
  MGI:6846267
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:75156927-75157018 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846267	rRNA gene	Chr18:75156927-75157018 (+)
129S1/SvImJ	ENSMUSG00200030147	rRNA gene	Chr18:72377587-72377678 (+)
A/J	ENSMUSG00195004962	rRNA gene	Chr18:72439776-72439867 (+)
AKR/J	ENSMUSG00220017710	rRNA gene	Chr18:72364154-72364245 (+)
BALB/cJ	ENSMUSG00180013658	rRNA gene	Chr18:73016325-73016416 (+)
C3H/HeJ	ENSMUSG00175013700	rRNA gene	Chr18:72571548-72571639 (+)
C57BL/6NJ	ENSMUSG00215031051	rRNA gene	Chr18:71920322-71920413 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028938	rRNA gene	Chr18:71483616-71483707 (+)
CBA/J	ENSMUSG00210035948	rRNA gene	Chr18:72528995-72529086 (+)
DBA/2J	ENSMUSG00185012026	rRNA gene	Chr18:72435195-72435286 (+)
FVB/NJ	ENSMUSG00205018522	rRNA gene	Chr18:72044088-72044179 (+)
JF1/MsJ	ENSUMUG00000037480	rRNA gene	Chr18:72346470-72346561 (+)
LP/J	ENSMUSG00230014479	rRNA gene	Chr18:74493228-74493319 (+)
NOD/ShiLtJ	ENSMUSG00190023189	rRNA gene	Chr18:72185256-72185347 (+)
NZO/HlLtJ	ENSMUSG00225035049	rRNA gene	Chr18:74347844-74347935 (+)
PWK/PhJ	ENSLUMG00010007089	rRNA gene	Chr18:72757083-72757174 (+)
SPRET/EiJ	ENSMSPG00010009556	rRNA gene	Chr18:73005413-73005504 (+)
WSB/EiJ	ENSIUOG00005008324	rRNA gene	Chr18:71973340-71973431 (+)

Homology

• Gene Tree
  Gm54896
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075461 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075461	Ensembl Gene Model | MGI Sequence Detail	92	C57BL/6J
transcript	ENSMUST00020182482	Ensembl | MGI Sequence Detail	92	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;