Gm54895 Gene Detail

Summary

• Symbol
  Gm54895
• Name
  predicted gene, 54895

• Feature Type
  miRNA gene
• IDs
  MGI:6846265
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:51054472-51054572 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846265	miRNA gene	Chr1:51054472-51054572 (+)
129S1/SvImJ	ENSMUSG00200002246	miRNA gene	Chr1:48543114-48543214 (+)
A/J	ENSMUSG00195001950	miRNA gene	Chr1:48426468-48426568 (+)
AKR/J	ENSMUSG00220003771	miRNA gene	Chr1:48195835-48195935 (+)
BALB/cJ	ENSMUSG00180003300	miRNA gene	Chr1:48343548-48343648 (+)
C3H/HeJ	ENSMUSG00175000201	miRNA gene	Chr1:48456044-48456144 (+)
C57BL/6NJ	ENSMUSG00215003197	miRNA gene	Chr1:48382346-48382446 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001050	miRNA gene	Chr1:48294647-48294747 (+)
CBA/J	ENSMUSG00210029338	miRNA gene	Chr1:48161210-48161310 (+)
DBA/2J	ENSMUSG00185030491	miRNA gene	Chr1:49280798-49280898 (+)
FVB/NJ	ENSMUSG00205004132	miRNA gene	Chr1:48102454-48102554 (+)
JF1/MsJ	ENSUMUG00000002818	miRNA gene	Chr1:48239774-48239874 (+)
LP/J	ENSMUSG00230001351	miRNA gene	Chr1:49276550-49276650 (+)
NOD/ShiLtJ	ENSMUSG00190002615	miRNA gene	Chr1:48299220-48299320 (+)
NZO/HlLtJ	ENSMUSG00225010136	miRNA gene	Chr1:52456315-52456415 (+)
PWK/PhJ	ENSLUMG00010002802	miRNA gene	Chr1:47799069-47799169 (+)
SPRET/EiJ	ENSMSPG00010013276	miRNA gene	Chr1:49476368-49476468 (+)
WSB/EiJ	ENSIUOG00005003772	miRNA gene	Chr1:47985962-47986062 (+)

Homology

• Gene Tree
  Gm54895
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075527 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075527	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020182029	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;