Gm54893 Gene Detail

Summary

• Symbol
  Gm54893
• Name
  predicted gene, 54893

• Feature Type
  miRNA gene
• IDs
  MGI:6846261
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:63654666-63654749 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846261	miRNA gene	Chr17:63654666-63654749 (+)
129S1/SvImJ	ENSMUSG00200016994	miRNA gene	Chr17:58971781-58971864 (+)
A/J	ENSMUSG00195007158	miRNA gene	Chr17:60331277-60331360 (+)
AKR/J	ENSMUSG00220013585	miRNA gene	Chr17:59412166-59412249 (+)
BALB/cJ	ENSMUSG00180006413	miRNA gene	Chr17:60075202-60075285 (+)
C3H/HeJ	ENSMUSG00175007789	miRNA gene	Chr17:59392154-59392237 (+)
C57BL/6NJ	ENSMUSG00215009817	miRNA gene	Chr17:59041219-59041302 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019311	miRNA gene	Chr17:60029339-60029422 (+)
CBA/J	ENSMUSG00210029457	miRNA gene	Chr17:59184459-59184542 (+)
DBA/2J	ENSMUSG00185023801	miRNA gene	Chr17:62031361-62031444 (+)
FVB/NJ	ENSMUSG00205007493	miRNA gene	Chr17:59678595-59678678 (+)
JF1/MsJ	ENSUMUG00000040448	miRNA gene	Chr17:61708702-61708785 (+)
LP/J	ENSMUSG00230017554	miRNA gene	Chr17:63014341-63014424 (+)
NOD/ShiLtJ	ENSMUSG00190011412	miRNA gene	Chr17:59168057-59168140 (+)
NZO/HlLtJ	ENSMUSG00225026307	miRNA gene	Chr17:65293552-65293635 (+)
PWK/PhJ	ENSLUMG00010009821	miRNA gene	Chr17:58976299-58976382 (+)
SPRET/EiJ	ENSMSPG00010005862	miRNA gene	Chr17:59346032-59346115 (+)
WSB/EiJ	ENSIUOG00005024424	miRNA gene	Chr17:59994074-59994157 (+)

Homology

• Gene Tree
  Gm54893
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002074993 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074993	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00020181755	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;