Gm54892 Gene Detail

Summary

• Symbol
  Gm54892
• Name
  predicted gene, 54892

• Feature Type
  rRNA gene
• IDs
  MGI:6846259
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr17:63403885-63403995 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  59 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846259	rRNA gene	Chr17:63403885-63403995 (-)
129S1/SvImJ	ENSMUSG00200016997	rRNA gene	Chr17:58722687-58722797 (-)
A/J	ENSMUSG00195007163	rRNA gene	Chr17:60080448-60080558 (-)
AKR/J	ENSMUSG00220013589	rRNA gene	Chr17:59161368-59161478 (-)
BALB/cJ	ENSMUSG00180006417	rRNA gene	Chr17:59824400-59824510 (-)
C3H/HeJ	ENSMUSG00175007795	rRNA gene	Chr17:59143072-59143182 (-)
C57BL/6NJ	ENSMUSG00215009827	rRNA gene	Chr17:58790410-58790520 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005019313	rRNA gene	Chr17:59798795-59798905 (-)
CBA/J	ENSMUSG00210029465	rRNA gene	Chr17:58935351-58935461 (-)
DBA/2J	ENSMUSG00185023805	rRNA gene	Chr17:61780576-61780686 (-)
FVB/NJ	ENSMUSG00205007498	rRNA gene	Chr17:59427794-59427904 (-)
JF1/MsJ	ENSUMUG00000040380	rRNA gene	Chr17:61473750-61473860 (-)
LP/J	ENSMUSG00230017769	rRNA gene	Chr17:62765255-62765365 (-)
NOD/ShiLtJ	ENSMUSG00190011422	rRNA gene	Chr17:58917253-58917363 (-)
NZO/HlLtJ	ENSMUSG00225026471	rRNA gene	Chr17:65042696-65042806 (-)
PWK/PhJ	ENSLUMG00010009825	rRNA gene	Chr17:58739942-58740052 (-)
SPRET/EiJ	ENSMSPG00010005853	rRNA gene	Chr17:59109633-59109743 (-)
WSB/EiJ	ENSIUOG00005024433	rRNA gene	Chr17:59757305-59757415 (-)

Homology

• Gene Tree
  Gm54892
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075126 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075126	Ensembl Gene Model | MGI Sequence Detail	111	C57BL/6J
transcript	ENSMUST00020182933	Ensembl | MGI Sequence Detail	111	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;