Gm54890 Gene Detail

Summary

• Symbol
  Gm54890
• Name
  predicted gene, 54890

• Feature Type
  miRNA gene
• IDs
  MGI:6846255
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:75043223-75043304 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846255	miRNA gene	Chr18:75043223-75043304 (-)
129S1/SvImJ	ENSMUSG00200029372	miRNA gene	Chr18:72262831-72262912 (-)
A/J	ENSMUSG00195004894	miRNA gene	Chr18:72326133-72326214 (-)
AKR/J	ENSMUSG00220017340	miRNA gene	Chr18:72249523-72249604 (-)
BALB/cJ	ENSMUSG00180013601	miRNA gene	Chr18:72902688-72902769 (-)
C3H/HeJ	ENSMUSG00175012573	miRNA gene	Chr18:72456905-72456986 (-)
C57BL/6NJ	ENSMUSG00215032435	miRNA gene	Chr18:71806600-71806681 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005028541	miRNA gene	Chr18:71369925-71370006 (-)
CBA/J	ENSMUSG00210036413	miRNA gene	Chr18:72414363-72414444 (-)
DBA/2J	ENSMUSG00185011452	miRNA gene	Chr18:72320549-72320630 (-)
FVB/NJ	ENSMUSG00205018048	miRNA gene	Chr18:71930393-71930474 (-)
JF1/MsJ	ENSUMUG00000033949	miRNA gene	Chr18:72231885-72231966 (-)
LP/J	ENSMUSG00230014515	miRNA gene	Chr18:74378485-74378566 (-)
NOD/ShiLtJ	ENSMUSG00190022620	miRNA gene	Chr18:72071635-72071716 (-)
NZO/HlLtJ	ENSMUSG00225035083	miRNA gene	Chr18:74234191-74234272 (-)
PWK/PhJ	ENSLUMG00010007094	miRNA gene	Chr18:72642508-72642589 (-)
SPRET/EiJ	ENSMSPG00010009423	miRNA gene	Chr18:72891729-72891810 (-)
WSB/EiJ	ENSIUOG00005008533	miRNA gene	Chr18:71858698-71858779 (-)

Homology

• Gene Tree
  Gm54890
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075101 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075101	Ensembl Gene Model | MGI Sequence Detail	82	C57BL/6J
transcript	ENSMUST00020182915	Ensembl | MGI Sequence Detail	82	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;