Gm54886 Gene Detail

Summary

• Symbol
  Gm54886
• Name
  predicted gene, 54886

• Feature Type
  miRNA gene
• IDs
  MGI:6846247
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr6:73369125-73369226 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846247	miRNA gene	Chr6:73369125-73369226 (+)
129S1/SvImJ	ENSMUSG00200013109	miRNA gene	Chr6:70262475-70262576 (+)
A/J	ENSMUSG00195048361	miRNA gene	Chr6:69985618-69985719 (+)
AKR/J	ENSMUSG00220046797	miRNA gene	Chr6:69039453-69039554 (+)
BALB/cJ	ENSMUSG00180038935	miRNA gene	Chr6:70401601-70401702 (+)
C3H/HeJ	ENSMUSG00175013000	miRNA gene	Chr6:107032013-107032113 (-)
C57BL/6NJ	ENSMUSG00215043701	miRNA gene	Chr6:70364038-70364139 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005037264	miRNA gene	Chr6:70501888-70501989 (+)
CBA/J	ENSMUSG00210043188	miRNA gene	Chr6:70212593-70212693 (+)
DBA/2J	ENSMUSG00185001010	miRNA gene	Chr6:70769114-70769214 (+)
FVB/NJ	ENSMUSG00205038655	miRNA gene	Chr6:69473025-69473126 (+)
JF1/MsJ	ENSUMUG00000047145	miRNA gene	Chr6:69808664-69808765 (+)
LP/J	ENSMUSG00230007702	miRNA gene	Chr6:71852500-71852601 (+)
NOD/ShiLtJ	ENSMUSG00190045138	miRNA gene	Chr6:69741367-69741468 (+)
NZO/HlLtJ	ENSMUSG00225006929	miRNA gene	Chr6:73824936-73825037 (+)
PWK/PhJ	ENSLUMG00010024209	miRNA gene	Chr6:69226938-69227039 (+)
SPRET/EiJ	ENSMSPG00010000398	miRNA gene	Chr6:71055712-71055813 (+)
WSB/EiJ	ENSIUOG00005026159	miRNA gene	Chr6:70763453-70763554 (+)

Homology

• Gene Tree
  Gm54886
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076411 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076411	Ensembl Gene Model | MGI Sequence Detail	102	C57BL/6J
transcript	ENSMUST00020183094	Ensembl | MGI Sequence Detail	102	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;