Gm54877 Gene Detail

Summary

• Symbol
  Gm54877
• Name
  predicted gene, 54877

• Feature Type
  miRNA gene
• IDs
  MGI:6846230
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:52014989-52015079 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846230	miRNA gene	Chr9:52014989-52015079 (-)
129S1/SvImJ	ENSMUSG00200018694	miRNA gene	Chr9:49175524-49175614 (-)
A/J	ENSMUSG00195024148	miRNA gene	Chr9:48861216-48861306 (-)
AKR/J	ENSMUSG00220040539	miRNA gene	Chr9:48959152-48959242 (-)
BALB/cJ	ENSMUSG00180032377	miRNA gene	Chr9:48972553-48972643 (-)
C3H/HeJ	ENSMUSG00175016371	miRNA gene	Chr9:48984525-48984615 (-)
C57BL/6NJ	ENSMUSG00215039038	miRNA gene	Chr9:48943377-48943467 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005015967	miRNA gene	Chr9:48912641-48912731 (-)
CBA/J	ENSMUSG00210017075	miRNA gene	Chr9:49061325-49061415 (-)
DBA/2J	ENSMUSG00185012587	miRNA gene	Chr9:49098961-49099051 (-)
FVB/NJ	ENSMUSG00205043823	miRNA gene	Chr9:49341349-49341439 (-)
JF1/MsJ	ENSUMUG00000045241	miRNA gene	Chr9:49150063-49150153 (-)
LP/J	ENSMUSG00230042592	miRNA gene	Chr9:49386926-49387016 (-)
NOD/ShiLtJ	ENSMUSG00190027304	miRNA gene	Chr9:49179004-49179094 (-)
NZO/HlLtJ	ENSMUSG00225044494	miRNA gene	Chr9:49355198-49355288 (-)
PWK/PhJ	ENSLUMG00010022743	miRNA gene	Chr9:49116686-49116776 (-)
SPRET/EiJ	ENSMSPG00010011967	miRNA gene	Chr9:49984291-49984381 (-)
WSB/EiJ	ENSIUOG00005021585	miRNA gene	Chr9:48586050-48586140 (-)

Homology

• Gene Tree
  Gm54877
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076614 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076614	Ensembl Gene Model | MGI Sequence Detail	91	C57BL/6J
transcript	ENSMUST00020183570	Ensembl | MGI Sequence Detail	91	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;