Gm54876 Gene Detail

Summary

• Symbol
  Gm54876
• Name
  predicted gene, 54876

• Feature Type
  miRNA gene
• IDs
  MGI:6846228
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:3172178-3172298 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  27 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846228	miRNA gene	Chr16:3172178-3172298 (-)
129S1/SvImJ	ENSMUSG00200011757	miRNA gene	Chr16:162892-163012 (-)
A/J	ENSMUSG00195052960	miRNA gene	Chr19:165089-165209 (-)
AKR/J	ENSMUSG00220017292	miRNA gene	Chr16:131213-131333 (-)
BALB/cJ	ENSMUSG00180051224	miRNA gene	Chr19:719931-720051 (-)
C3H/HeJ	ENSMUSG00175029697	miRNA gene	Chr16:162640-162760 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005033209	miRNA gene	Chr16:163738-163858 (-)
CBA/J	ENSMUSG00210012045	miRNA gene	Chr16:169268-169388 (-)
DBA/2J	ENSMUSG00185010549	miRNA gene	Chr16:117645-117765 (-)
FVB/NJ	ENSMUSG00205052220	miRNA gene	Chr19:155592-155712 (-)
JF1/MsJ	ENSUMUG00000056809	miRNA gene	Chr19:163039-163159 (-)
LP/J	ENSMUSG00230012010	miRNA gene	Chr16:2658703-2658823 (-)
NOD/ShiLtJ	ENSMUSG00190026651	miRNA gene	Chr16:162263-162383 (-)
NZO/HlLtJ	ENSMUSG00225023121	miRNA gene	Chr16:5901020-5901140 (-)
PWK/PhJ	ENSLUMG00010017778	miRNA gene	Chr16:119107-119227 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005016968	miRNA gene	Chr16:161243-161363 (-)

Homology

• Gene Tree
  Gm54876
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075353 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075353	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020183218	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;