Gm54874 Gene Detail

Summary

• Symbol
  Gm54874
• Name
  predicted gene, 54874

• Feature Type
  snRNA gene
• IDs
  MGI:6846224
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:88411415-88411498 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  119 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846224	snRNA gene	Chr16:88411415-88411498 (-)
129S1/SvImJ	ENSMUSG00200037929	snRNA gene	Chr16:85289552-85289635 (-)
A/J	ENSMUSG00195029288	snRNA gene	Chr16:85090448-85090531 (-)
AKR/J	ENSMUSG00220016051	snRNA gene	Chr16:85282184-85282267 (-)
BALB/cJ	ENSMUSG00180016401	snRNA gene	Chr16:85163741-85163824 (-)
C3H/HeJ	ENSMUSG00175016155	snRNA gene	Chr16:85501968-85502051 (-)
C57BL/6NJ	ENSMUSG00215032170	snRNA gene	Chr16:85292377-85292460 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020286	snRNA gene	Chr16:84859734-84859817 (-)
CBA/J	ENSMUSG00210043399	snRNA gene	Chr16:85392450-85392533 (-)
DBA/2J	ENSMUSG00185035151	snRNA gene	Chr16:85343781-85343864 (-)
FVB/NJ	ENSMUSG00205025472	snRNA gene	Chr16:85140568-85140651 (-)
JF1/MsJ	ENSUMUG00000047716	snRNA gene	Chr16:85497208-85497291 (-)
LP/J	ENSMUSG00230036442	snRNA gene	Chr16:87849270-87849353 (-)
NOD/ShiLtJ	ENSMUSG00190029118	snRNA gene	Chr16:85318213-85318296 (-)
NZO/HlLtJ	ENSMUSG00225031529	snRNA gene	Chr16:91033777-91033860 (-)
PWK/PhJ	ENSLUMG00010014632	snRNA gene	Chr16:85139646-85139729 (-)
SPRET/EiJ	ENSMSPG00010030853	snRNA gene	Chr16:86281061-86281144 (-)
WSB/EiJ	ENSIUOG00005021001	snRNA gene	Chr16:85278349-85278432 (-)

Homology

• Gene Tree
  Gm54874
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076486 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076486	Ensembl Gene Model | MGI Sequence Detail	84	C57BL/6J
transcript	ENSMUST00020182632	Ensembl | MGI Sequence Detail	84	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;