Gm54873 Gene Detail

Summary

• Symbol
  Gm54873
• Name
  predicted gene, 54873

• Feature Type
  rRNA gene
• IDs
  MGI:6846222
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:35414884-35414991 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  110 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846222	rRNA gene	Chr9:35414884-35414991 (-)
129S1/SvImJ	ENSMUSG00200040213	rRNA gene	Chr9:32393894-32394001 (-)
A/J	ENSMUSG00195050926	rRNA gene	Chr9:32185325-32185432 (-)
AKR/J	ENSMUSG00220046316	rRNA gene	Chr9:32225740-32225847 (-)
BALB/cJ	ENSMUSG00180046943	rRNA gene	Chr9:32313642-32313749 (-)
C3H/HeJ	ENSMUSG00175049372	rRNA gene	Chr9:32314824-32314931 (-)
C57BL/6NJ	ENSMUSG00215033245	rRNA gene	Chr9:32314550-32314657 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005045447	rRNA gene	Chr9:32285771-32285878 (-)
CBA/J	ENSMUSG00210046582	rRNA gene	Chr9:32325718-32325825 (-)
DBA/2J	ENSMUSG00185037746	rRNA gene	Chr9:32365727-32365834 (-)
FVB/NJ	ENSMUSG00205041071	rRNA gene	Chr9:32680372-32680479 (-)
JF1/MsJ	ENSUMUG00000051045	rRNA gene	Chr9:32549919-32550026 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190030076	rRNA gene	Chr9:32443217-32443324 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010047888	rRNA gene	Chr9:32431528-32431635 (-)
SPRET/EiJ	ENSMSPG00010038833	rRNA gene	Chr9:32856978-32857085 (-)
WSB/EiJ	ENSIUOG00005045531	rRNA gene	Chr9:31887003-31887110 (-)

Homology

• Gene Tree
  Gm54873
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075331 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075331	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020181854	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;