Gm54869 Gene Detail

Summary

• Symbol
  Gm54869
• Name
  predicted gene, 54869

• Feature Type
  miRNA gene
• IDs
  MGI:6846214
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr18:73757999-73758108 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  134 from dbSNP Build 142
• Strain Annotations
  11

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846214	miRNA gene	Chr18:73757999-73758108 (+)
129S1/SvImJ	ENSMUSG00200029977	miRNA gene	Chr18:70979341-70979450 (+)
A/J	ENSMUSG00195005102	miRNA gene	Chr18:71030793-71030902 (+)
AKR/J	ENSMUSG00220017315	miRNA gene	Chr18:70973688-70973797 (+)
BALB/cJ	ENSMUSG00180013402	miRNA gene	Chr18:71609754-71609863 (+)
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215021458	miRNA gene	Chr18:70521128-70521237 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	ENSMUSG00205019064	miRNA gene	Chr18:70497048-70497157 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230014466	miRNA gene	Chr18:73103560-73103669 (+)
NOD/ShiLtJ	ENSMUSG00190022849	miRNA gene	Chr18:70776770-70776879 (+)
NZO/HlLtJ	ENSMUSG00225035030	miRNA gene	Chr18:72953685-72953794 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005006512	miRNA gene	Chr18:70579882-70579991 (+)

Homology

• Gene Tree
  Gm54869
  

Sequences &
Gene Models

• All Sequences
  13

• Ensembl
  ENSMUSG00002076644 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076644	Ensembl Gene Model | MGI Sequence Detail	110	C57BL/6J
transcript	ENSMUST00020183017	Ensembl | MGI Sequence Detail	110	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;