Gm54861 Gene Detail

Summary

• Symbol
  Gm54861
• Name
  predicted gene, 54861

• Feature Type
  snoRNA gene
• IDs
  MGI:6846198
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:84965737-84965889 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846198	snoRNA gene	Chr16:84965737-84965889 (+)
129S1/SvImJ	ENSMUSG00200038598	snoRNA gene	Chr16:81865338-81865490 (+)
A/J	ENSMUSG00195030346	snoRNA gene	Chr16:81666586-81666738 (+)
AKR/J	ENSMUSG00220017843	snoRNA gene	Chr16:81812159-81812311 (+)
BALB/cJ	ENSMUSG00180002104	snoRNA gene	Chr16:81711123-81711275 (+)
C3H/HeJ	ENSMUSG00175016321	snoRNA gene	Chr16:82026576-82026728 (+)
C57BL/6NJ	ENSMUSG00215035550	snoRNA gene	Chr16:81830356-81830508 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007673	snoRNA gene	Chr16:81483897-81484046 (+)
CBA/J	ENSMUSG00210044566	snoRNA gene	Chr16:81936566-81936718 (+)
DBA/2J	ENSMUSG00185005435	snoRNA gene	Chr16:81878438-81878590 (+)
FVB/NJ	ENSMUSG00205028063	snoRNA gene	Chr16:81696193-81696345 (+)
JF1/MsJ	ENSUMUG00000044220	snoRNA gene	Chr16:82004593-82004745 (+)
LP/J	ENSMUSG00230035921	snoRNA gene	Chr16:84425428-84425580 (+)
NOD/ShiLtJ	ENSMUSG00190027949	snoRNA gene	Chr16:81883782-81883934 (+)
NZO/HlLtJ	ENSMUSG00225031213	snoRNA gene	Chr16:87567155-87567307 (+)
PWK/PhJ	ENSLUMG00010005324	snoRNA gene	Chr16:81676921-81677073 (+)
SPRET/EiJ	ENSMSPG00010032452	snoRNA gene	Chr16:82636762-82636914 (+)
WSB/EiJ	ENSIUOG00005018018	snoRNA gene	Chr16:81807843-81807995 (+)

Homology

• Gene Tree
  Gm54861
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075875 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075875	Ensembl Gene Model | MGI Sequence Detail	153	C57BL/6J
transcript	ENSMUST00020183432	Ensembl | MGI Sequence Detail	153	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;