Gm54857 Gene Detail

Summary

• Symbol
  Gm54857
• Name
  predicted gene, 54857

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846190
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:103094448-103094609 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846190	unclassified non-coding RNA gene	Chr12:103094448-103094609 (+)
129S1/SvImJ	ENSMUSG00200029690	unclassified non-coding RNA gene	Chr12:94894483-94894644 (+)
A/J	ENSMUSG00195022669	unclassified non-coding RNA gene	Chr12:97421266-97421427 (+)
AKR/J	ENSMUSG00220042583	unclassified non-coding RNA gene	Chr12:95368945-95369106 (+)
BALB/cJ	ENSMUSG00180036837	unclassified non-coding RNA gene	Chr12:96614938-96615099 (+)
C3H/HeJ	ENSMUSG00175035940	unclassified non-coding RNA gene	Chr12:99234042-99234203 (+)
C57BL/6NJ	ENSMUSG00215042616	unclassified non-coding RNA gene	Chr12:95895925-95896086 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020486	unclassified non-coding RNA gene	Chr12:95285300-95285461 (+)
CBA/J	ENSMUSG00210014789	unclassified non-coding RNA gene	Chr12:96268226-96268387 (+)
DBA/2J	ENSMUSG00185046595	unclassified non-coding RNA gene	Chr12:98072896-98073057 (+)
FVB/NJ	ENSMUSG00205019265	unclassified non-coding RNA gene	Chr12:95286224-95286385 (+)
JF1/MsJ	ENSUMUG00000025210	unclassified non-coding RNA gene	Chr12:102808114-102808275 (+)
LP/J	ENSMUSG00230030972	unclassified non-coding RNA gene	Chr12:105159473-105159634 (+)
NOD/ShiLtJ	ENSMUSG00190027410	unclassified non-coding RNA gene	Chr12:89869371-89869532 (-)
NZO/HlLtJ	ENSMUSG00225038941	unclassified non-coding RNA gene	Chr12:106870858-106871019 (+)
PWK/PhJ	ENSLUMG00010013820	unclassified non-coding RNA gene	Chr12:96246816-96246977 (+)
SPRET/EiJ	ENSMSPG00010019311	unclassified non-coding RNA gene	Chr12:98762544-98762705 (+)
WSB/EiJ	ENSIUOG00005008862	unclassified non-coding RNA gene	Chr12:95299335-95299496 (+)

Homology

• Gene Tree
  Gm54857
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075557 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075557	Ensembl Gene Model | MGI Sequence Detail	162	C57BL/6J
transcript	ENSMUST00020182401	Ensembl | MGI Sequence Detail	162	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;