Gm54856 Gene Detail

Summary

• Symbol
  Gm54856
• Name
  predicted gene, 54856

• Feature Type
  miRNA gene
• IDs
  MGI:6846188
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:102954088-102954222 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846188	miRNA gene	Chr12:102954088-102954222 (+)
129S1/SvImJ	ENSMUSG00200029665	miRNA gene	Chr12:94754431-94754565 (+)
A/J	ENSMUSG00195022645	miRNA gene	Chr12:97280849-97280983 (+)
AKR/J	ENSMUSG00220042548	miRNA gene	Chr12:95228869-95229003 (+)
BALB/cJ	ENSMUSG00180036795	miRNA gene	Chr12:96474882-96475016 (+)
C3H/HeJ	ENSMUSG00175035907	miRNA gene	Chr12:99093638-99093772 (+)
C57BL/6NJ	ENSMUSG00215042599	miRNA gene	Chr12:95755497-95755631 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005020468	miRNA gene	Chr12:95142648-95142782 (+)
CBA/J	ENSMUSG00210014783	miRNA gene	Chr12:96128173-96128307 (+)
DBA/2J	ENSMUSG00185046569	miRNA gene	Chr12:97932855-97932989 (+)
FVB/NJ	ENSMUSG00205019240	miRNA gene	Chr12:95145829-95145963 (+)
JF1/MsJ	ENSUMUG00000025184	miRNA gene	Chr12:102666219-102666353 (+)
LP/J	ENSMUSG00230031252	miRNA gene	Chr12:105019423-105019557 (+)
NOD/ShiLtJ	ENSMUSG00190027344	miRNA gene	Chr12:90009458-90009592 (-)
NZO/HlLtJ	ENSMUSG00225039187	miRNA gene	Chr12:106730451-106730585 (+)
PWK/PhJ	ENSLUMG00010013811	miRNA gene	Chr12:96106205-96106339 (+)
SPRET/EiJ	ENSMSPG00010019286	miRNA gene	Chr12:98621903-98622037 (+)
WSB/EiJ	ENSIUOG00005008859	miRNA gene	Chr12:95158993-95159127 (+)

Homology

• Gene Tree
  Gm54856
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075821 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075821	Ensembl Gene Model | MGI Sequence Detail	135	C57BL/6J
transcript	ENSMUST00020181987	Ensembl | MGI Sequence Detail	135	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;