Gm54853 Gene Detail

Summary

• Symbol
  Gm54853
• Name
  predicted gene, 54853

• Feature Type
  miRNA gene
• IDs
  MGI:6846182
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:107291769-107291853 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  78 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846182	miRNA gene	Chr4:107291769-107291853 (+)
129S1/SvImJ	ENSMUSG00200049997	miRNA gene	Chr4:102355212-102355296 (+)
A/J	ENSMUSG00195047302	miRNA gene	Chr4:102898099-102898183 (+)
AKR/J	ENSMUSG00220012739	miRNA gene	Chr4:102302531-102302615 (+)
BALB/cJ	ENSMUSG00180047044	miRNA gene	Chr4:101738526-101738610 (+)
C3H/HeJ	ENSMUSG00175040747	miRNA gene	Chr4:102743000-102743084 (+)
C57BL/6NJ	ENSMUSG00215032746	miRNA gene	Chr4:102623847-102623931 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007602	miRNA gene	Chr4:101846319-101846403 (+)
CBA/J	ENSMUSG00210053241	miRNA gene	Chr4:102376044-102376128 (+)
DBA/2J	ENSMUSG00185050337	miRNA gene	Chr4:103078120-103078204 (+)
FVB/NJ	ENSMUSG00205016339	miRNA gene	Chr4:101309767-101309851 (+)
JF1/MsJ	ENSUMUG00000049250	miRNA gene	Chr4:103092842-103092926 (+)
LP/J	ENSMUSG00230009668	miRNA gene	Chr4:106391659-106391743 (+)
NOD/ShiLtJ	ENSMUSG00190047073	miRNA gene	Chr4:101745815-101745899 (+)
NZO/HlLtJ	ENSMUSG00225032924	miRNA gene	Chr4:111496702-111496786 (+)
PWK/PhJ	ENSLUMG00010018554	miRNA gene	Chr4:100816505-100816589 (+)
SPRET/EiJ	ENSMSPG00010031422	miRNA gene	Chr4:103058364-103058448 (+)
WSB/EiJ	ENSIUOG00005044986	miRNA gene	Chr4:101952629-101952713 (+)

Homology

• Gene Tree
  Gm54853
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075537 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075537	Ensembl Gene Model | MGI Sequence Detail	85	C57BL/6J
transcript	ENSMUST00020181794	Ensembl | MGI Sequence Detail	85	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;