Gm54852 Gene Detail

Summary

• Symbol
  Gm54852
• Name
  predicted gene, 54852

• Feature Type
  miRNA gene
• IDs
  MGI:6846180
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:76469323-76469398 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  114 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846180	miRNA gene	Chr13:76469323-76469398 (-)
129S1/SvImJ	ENSMUSG00200006115	miRNA gene	Chr13:70893259-70893334 (-)
A/J	ENSMUSG00195026306	miRNA gene	Chr13:71452925-71453000 (-)
AKR/J	ENSMUSG00220040918	miRNA gene	Chr13:70033874-70033949 (-)
BALB/cJ	ENSMUSG00180001522	miRNA gene	Chr13:71951162-71951237 (-)
C3H/HeJ	ENSMUSG00175020006	miRNA gene	Chr13:72229459-72229534 (-)
C57BL/6NJ	ENSMUSG00215002564	miRNA gene	Chr13:72042257-72042332 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005004185	miRNA gene	Chr13:71515468-71515543 (-)
CBA/J	ENSMUSG00210005915	miRNA gene	Chr13:71538227-71538302 (-)
DBA/2J	ENSMUSG00185018863	miRNA gene	Chr13:75226335-75226410 (-)
FVB/NJ	ENSMUSG00205013964	miRNA gene	Chr13:70926943-70927018 (-)
JF1/MsJ	ENSUMUG00000035555	miRNA gene	Chr13:74987358-74987433 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190008864	miRNA gene	Chr13:71568495-71568570 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010014804	miRNA gene	Chr13:71096090-71096165 (-)
SPRET/EiJ	ENSMSPG00010001419	miRNA gene	Chr13:71977351-71977429 (-)
WSB/EiJ	ENSIUOG00005017955	miRNA gene	Chr13:70774639-70774714 (-)

Homology

• Gene Tree
  Gm54852
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002075677 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075677	Ensembl Gene Model | MGI Sequence Detail	76	C57BL/6J
transcript	ENSMUST00020183307	Ensembl | MGI Sequence Detail	76	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;