Gm54847 Gene Detail

Summary

• Symbol
  Gm54847
• Name
  predicted gene, 54847

• Feature Type
  snoRNA gene
• IDs
  MGI:6846170
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:38089355-38089422 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846170	snoRNA gene	Chr10:38089355-38089422 (+)
129S1/SvImJ	ENSMUSG00200009151	snoRNA gene	Chr10:34935999-34936066 (+)
A/J	ENSMUSG00195019444	snoRNA gene	Chr10:35244302-35244369 (+)
AKR/J	ENSMUSG00220030651	snoRNA gene	Chr10:34922683-34922750 (+)
BALB/cJ	ENSMUSG00180017858	snoRNA gene	Chr10:35332334-35332401 (+)
C3H/HeJ	ENSMUSG00175012346	snoRNA gene	Chr10:35120020-35120087 (+)
C57BL/6NJ	ENSMUSG00215010649	snoRNA gene	Chr10:34880870-34880937 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029605	snoRNA gene	Chr10:35324627-35324694 (+)
CBA/J	ENSMUSG00210026297	snoRNA gene	Chr10:35020215-35020282 (+)
DBA/2J	ENSMUSG00185008279	snoRNA gene	Chr10:35172735-35172802 (+)
FVB/NJ	ENSMUSG00205013777	snoRNA gene	Chr10:35118845-35118912 (+)
JF1/MsJ	ENSUMUG00000037497	snoRNA gene	Chr10:34943419-34943486 (+)
LP/J	ENSMUSG00230016485	snoRNA gene	Chr10:36933410-36933477 (+)
NOD/ShiLtJ	ENSMUSG00190036305	snoRNA gene	Chr10:35302563-35302630 (+)
NZO/HlLtJ	ENSMUSG00225018090	snoRNA gene	Chr10:41237716-41237783 (+)
PWK/PhJ	ENSLUMG00010008114	snoRNA gene	Chr10:35050664-35050731 (+)
SPRET/EiJ	ENSMSPG00010022147	snoRNA gene	Chr10:36070583-36070650 (+)
WSB/EiJ	ENSIUOG00005015355	snoRNA gene	Chr10:34815377-34815444 (+)

Homology

• Gene Tree
  Gm54847
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076946 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076946	Ensembl Gene Model | MGI Sequence Detail	68	C57BL/6J
transcript	ENSMUST00020183372	Ensembl | MGI Sequence Detail	68	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;