Gm54846 Gene Detail

Summary

• Symbol
  Gm54846
• Name
  predicted gene, 54846

• Feature Type
  miRNA gene
• IDs
  MGI:6846168
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:37807676-37807776 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846168	miRNA gene	Chr10:37807676-37807776 (+)
129S1/SvImJ	ENSMUSG00200009154	miRNA gene	Chr10:34654311-34654411 (+)
A/J	ENSMUSG00195019452	miRNA gene	Chr10:34962163-34962263 (+)
AKR/J	ENSMUSG00220030677	miRNA gene	Chr10:34640995-34641095 (+)
BALB/cJ	ENSMUSG00180017870	miRNA gene	Chr10:35050684-35050784 (+)
C3H/HeJ	ENSMUSG00175012349	miRNA gene	Chr10:34838324-34838424 (+)
C57BL/6NJ	ENSMUSG00215010654	miRNA gene	Chr10:34599127-34599227 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005029615	miRNA gene	Chr10:35055153-35055253 (+)
CBA/J	ENSMUSG00210026300	miRNA gene	Chr10:34738571-34738671 (+)
DBA/2J	ENSMUSG00185008290	miRNA gene	Chr10:34891067-34891167 (+)
FVB/NJ	ENSMUSG00205013787	miRNA gene	Chr10:34834992-34835092 (+)
JF1/MsJ	ENSUMUG00000037314	miRNA gene	Chr10:34652813-34652913 (+)
LP/J	ENSMUSG00230015922	miRNA gene	Chr10:36651758-36651858 (+)
NOD/ShiLtJ	ENSMUSG00190036336	miRNA gene	Chr10:35020914-35021014 (+)
NZO/HlLtJ	ENSMUSG00225033543	miRNA gene	Chr10:40950312-40950412 (+)
NZO/HlLtJ	ENSMUSG00225017811	miRNA gene	Chr9:5133032-5133132 (-)
NZO/HlLtJ	ENSMUSG00225046868	miRNA gene	Chr13:20514771-20514875 (+)
PWK/PhJ	ENSLUMG00010008117	miRNA gene	Chr10:34764320-34764420 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005015358	miRNA gene	Chr10:34532566-34532666 (+)

Homology

• Gene Tree
  Gm54846
  

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00002076892 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076892	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020183172	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;