Gm54844 Gene Detail

Summary

• Symbol
  Gm54844
• Name
  predicted gene, 54844

• Feature Type
  rRNA gene
• IDs
  MGI:6846164
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:84614985-84615082 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846164	rRNA gene	Chr16:84614985-84615082 (+)
129S1/SvImJ	ENSMUSG00200037950	rRNA gene	Chr16:81514445-81514542 (+)
A/J	ENSMUSG00195022933	rRNA gene	Chr16:81309010-81309107 (+)
AKR/J	ENSMUSG00220018090	rRNA gene	Chr16:81462587-81462684 (+)
BALB/cJ	ENSMUSG00180002184	rRNA gene	Chr16:81351277-81351374 (+)
C3H/HeJ	ENSMUSG00175017237	rRNA gene	Chr16:81664302-81664399 (+)
C57BL/6NJ	ENSMUSG00215032411	rRNA gene	Chr16:81477257-81477354 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007484	rRNA gene	Chr16:81134870-81134967 (+)
CBA/J	ENSMUSG00210041765	rRNA gene	Chr16:81576724-81576821 (+)
DBA/2J	ENSMUSG00185005443	rRNA gene	Chr16:81520877-81520974 (+)
FVB/NJ	ENSMUSG00205014877	rRNA gene	Chr16:81337527-81337624 (+)
JF1/MsJ	ENSUMUG00000046711	rRNA gene	Chr16:81659434-81659531 (+)
LP/J	ENSMUSG00230036185	rRNA gene	Chr16:84074338-84074435 (+)
NOD/ShiLtJ	ENSMUSG00190028756	rRNA gene	Chr16:81526249-81526346 (+)
NZO/HlLtJ	ENSMUSG00225031480	rRNA gene	Chr16:87207336-87207433 (+)
PWK/PhJ	ENSLUMG00010005368	rRNA gene	Chr16:81314652-81314749 (+)
SPRET/EiJ	ENSMSPG00010031852	rRNA gene	Chr16:82284058-82284155 (+)
WSB/EiJ	ENSIUOG00005018048	rRNA gene	Chr16:81453004-81453101 (+)

Homology

• Gene Tree
  Gm54844
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076438 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076438	Ensembl Gene Model | MGI Sequence Detail	98	C57BL/6J
transcript	ENSMUST00020181720	Ensembl | MGI Sequence Detail	98	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;