Gm54843 Gene Detail

Summary

• Symbol
  Gm54843
• Name
  predicted gene, 54843

• Feature Type
  snRNA gene
• IDs
  MGI:6846162
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:106689694-106689797 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846162	snRNA gene	Chr9:106689694-106689797 (-)
129S1/SvImJ	ENSMUSG00200044158	snRNA gene	Chr9:103885388-103885492 (-)
A/J	ENSMUSG00195046076	snRNA gene	Chr9:103110437-103110541 (-)
AKR/J	ENSMUSG00220029406	snRNA gene	Chr9:103500320-103500424 (-)
BALB/cJ	ENSMUSG00180034371	snRNA gene	Chr9:103426897-103427001 (-)
C3H/HeJ	ENSMUSG00175045463	snRNA gene	Chr9:103769254-103769358 (-)
C57BL/6NJ	ENSMUSG00215041048	snRNA gene	Chr9:103739315-103739418 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036542	snRNA gene	Chr9:103528256-103528389 (-)
CBA/J	ENSMUSG00210044067	snRNA gene	Chr9:103609585-103609688 (-)
DBA/2J	ENSMUSG00185046256	snRNA gene	Chr9:103774320-103774423 (-)
FVB/NJ	ENSMUSG00205050765	snRNA gene	Chr9:103780973-103781077 (-)
JF1/MsJ	ENSUMUG00000055563	snRNA gene	Chr9:103597513-103597616 (-)
LP/J	ENSMUSG00230050634	snRNA gene	Chr9:103920691-103920795 (-)
NOD/ShiLtJ	ENSMUSG00190051456	snRNA gene	Chr9:103412301-103412405 (-)
NZO/HlLtJ	ENSMUSG00225024805	snRNA gene	Chr9:104154803-104154907 (-)
PWK/PhJ	ENSLUMG00010043430	snRNA gene	Chr9:103543735-103543838 (-)
SPRET/EiJ	ENSMSPG00010048156	snRNA gene	Chr9:105400269-105400372 (-)
WSB/EiJ	ENSIUOG00005048872	snRNA gene	Chr9:102863639-102863743 (-)

Homology

• Gene Tree
  Gm54843
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075542 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075542	Ensembl Gene Model | MGI Sequence Detail	104	C57BL/6J
transcript	ENSMUST00020181791	Ensembl | MGI Sequence Detail	104	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;