Gm54839 Gene Detail

Summary

• Symbol
  Gm54839
• Name
  predicted gene, 54839

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846154
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:84416695-84417016 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846154	unclassified non-coding RNA gene	Chr16:84416695-84417016 (-)
129S1/SvImJ	ENSMUSG00200038072	unclassified non-coding RNA gene	Chr16:81316175-81316496 (-)
A/J	ENSMUSG00195022983	unclassified non-coding RNA gene	Chr16:81110650-81110971 (-)
AKR/J	ENSMUSG00220017764	unclassified non-coding RNA gene	Chr16:81264277-81264598 (-)
BALB/cJ	ENSMUSG00180002230	unclassified non-coding RNA gene	Chr16:81154956-81155277 (-)
C3H/HeJ	ENSMUSG00175015991	unclassified non-coding RNA gene	Chr16:81465965-81466286 (-)
C57BL/6NJ	ENSMUSG00215035244	unclassified non-coding RNA gene	Chr16:81278944-81279265 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007384	unclassified non-coding RNA gene	Chr16:80940720-80941041 (-)
CBA/J	ENSMUSG00210043826	unclassified non-coding RNA gene	Chr16:81380450-81380771 (-)
DBA/2J	ENSMUSG00185005333	unclassified non-coding RNA gene	Chr16:81322587-81322908 (-)
FVB/NJ	ENSMUSG00205014901	unclassified non-coding RNA gene	Chr16:81139180-81139501 (-)
JF1/MsJ	ENSUMUG00000012502	unclassified non-coding RNA gene	Chr16:81461511-81461832 (-)
LP/J	ENSMUSG00230036209	unclassified non-coding RNA gene	Chr16:83876084-83876405 (-)
NOD/ShiLtJ	ENSMUSG00190027242	unclassified non-coding RNA gene	Chr16:81327962-81328283 (-)
NZO/HlLtJ	ENSMUSG00225031330	unclassified non-coding RNA gene	Chr16:87011049-87011370 (-)
PWK/PhJ	ENSLUMG00010005242	unclassified non-coding RNA gene	Chr16:81112700-81113021 (-)
SPRET/EiJ	ENSMSPG00010030396	unclassified non-coding RNA gene	Chr16:82080711-82081032 (-)
WSB/EiJ	ENSIUOG00005017874	unclassified non-coding RNA gene	Chr16:81254683-81255004 (-)

Homology

• Gene Tree
  Gm54839
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076550 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076550	Ensembl Gene Model | MGI Sequence Detail	322	C57BL/6J
transcript	ENSMUST00020182305	Ensembl | MGI Sequence Detail	322	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;