Gm54838 Gene Detail

Summary

• Symbol
  Gm54838
• Name
  predicted gene, 54838

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846152
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:81058591-81058903 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  223 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846152	unclassified non-coding RNA gene	Chr16:81058591-81058903 (-)
129S1/SvImJ	ENSMUSG00200015905	unclassified non-coding RNA gene	Chr16:77946923-77947235 (-)
A/J	ENSMUSG00195023830	unclassified non-coding RNA gene	Chr16:77715081-77715393 (-)
AKR/J	ENSMUSG00220017984	unclassified non-coding RNA gene	Chr16:77905191-77905503 (-)
BALB/cJ	ENSMUSG00180002238	unclassified non-coding RNA gene	Chr16:77793307-77793619 (-)
C3H/HeJ	ENSMUSG00175009118	unclassified non-coding RNA gene	Chr16:78091590-78091902 (-)
C57BL/6NJ	ENSMUSG00215001666	unclassified non-coding RNA gene	Chr16:77918935-77919247 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005007699	unclassified non-coding RNA gene	Chr16:77627829-77628141 (-)
CBA/J	ENSMUSG00210020028	unclassified non-coding RNA gene	Chr16:78019445-78019757 (-)
DBA/2J	ENSMUSG00185005213	unclassified non-coding RNA gene	Chr16:77953497-77953809 (-)
FVB/NJ	ENSMUSG00205016744	unclassified non-coding RNA gene	Chr16:77790308-77790620 (-)
JF1/MsJ	ENSUMUG00000012436	unclassified non-coding RNA gene	Chr16:78077431-78077743 (-)
LP/J	ENSMUSG00230020213	unclassified non-coding RNA gene	Chr16:80507809-80508121 (-)
NOD/ShiLtJ	ENSMUSG00190011053	unclassified non-coding RNA gene	Chr16:77942050-77942362 (-)
NZO/HlLtJ	ENSMUSG00225030976	unclassified non-coding RNA gene	Chr16:83663327-83663639 (-)
PWK/PhJ	ENSLUMG00010005278	unclassified non-coding RNA gene	Chr16:77722558-77722852 (-)
SPRET/EiJ	ENSMSPG00010015315	unclassified non-coding RNA gene	Chr16:78748035-78748329 (-)
WSB/EiJ	ENSIUOG00005017375	unclassified non-coding RNA gene	Chr16:77899678-77899990 (-)

Homology

• Gene Tree
  Gm54838
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076261 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076261	Ensembl Gene Model | MGI Sequence Detail	313	C57BL/6J
transcript	ENSMUST00020183437	Ensembl | MGI Sequence Detail	313	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;