Gm54825 Gene Detail

Summary

• Symbol
  Gm54825
• Name
  predicted gene, 54825

• Feature Type
  snoRNA gene
• IDs
  MGI:6846126
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:97671008-97671102 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  137 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846126	snoRNA gene	Chr11:97671008-97671102 (-)
129S1/SvImJ	ENSMUSG00200053093	snoRNA gene	Chr11:94918126-94918220 (-)
A/J	ENSMUSG00195052452	snoRNA gene	Chr11:94640907-94641001 (-)
AKR/J	ENSMUSG00220052293	snoRNA gene	Chr11:94900051-94900145 (-)
BALB/cJ	ENSMUSG00180052607	snoRNA gene	Chr11:94912656-94912750 (-)
C3H/HeJ	ENSMUSG00175052019	snoRNA gene	Chr11:94898171-94898265 (-)
C57BL/6NJ	ENSMUSG00215054082	snoRNA gene	Chr11:94489036-94489130 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051468	snoRNA gene	Chr11:94351959-94352053 (-)
CBA/J	ENSMUSG00210053590	snoRNA gene	Chr11:94602976-94603070 (-)
DBA/2J	ENSMUSG00185052029	snoRNA gene	Chr11:94948069-94948163 (-)
FVB/NJ	ENSMUSG00205049866	snoRNA gene	Chr11:94814938-94815032 (-)
JF1/MsJ	ENSUMUG00000055451	snoRNA gene	Chr11:95252362-95252456 (-)
LP/J	ENSMUSG00230050977	snoRNA gene	Chr11:96001025-96001119 (-)
NOD/ShiLtJ	ENSMUSG00190052470	snoRNA gene	Chr11:94990148-94990242 (-)
NZO/HlLtJ	ENSMUSG00225052668	snoRNA gene	Chr11:98054237-98054331 (-)
PWK/PhJ	ENSLUMG00010051742	snoRNA gene	Chr11:94803403-94803497 (-)
SPRET/EiJ	ENSMSPG00010051201	snoRNA gene	Chr11:95299036-95299129 (-)
WSB/EiJ	ENSIUOG00005051874	snoRNA gene	Chr11:94753488-94753582 (-)

Homology

• Gene Tree
  Gm54825
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075586 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075586	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020181839	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;