Gm54823 Gene Detail

Summary

• Symbol
  Gm54823
• Name
  predicted gene, 54823

• Feature Type
  unclassified non-coding RNA gene
• IDs
  MGI:6846122
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr9:106513517-106513782 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  132 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846122	unclassified non-coding RNA gene	Chr9:106513517-106513782 (+)
129S1/SvImJ	ENSMUSG00200044164	unclassified non-coding RNA gene	Chr9:103706493-103706758 (+)
A/J	ENSMUSG00195046097	unclassified non-coding RNA gene	Chr9:102931506-102931771 (+)
AKR/J	ENSMUSG00220029427	unclassified non-coding RNA gene	Chr9:103321402-103321667 (+)
BALB/cJ	ENSMUSG00180034390	unclassified non-coding RNA gene	Chr9:103247972-103248237 (+)
C3H/HeJ	ENSMUSG00175045492	unclassified non-coding RNA gene	Chr9:103590346-103590611 (+)
C57BL/6NJ	ENSMUSG00215041061	unclassified non-coding RNA gene	Chr9:103563111-103563376 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036522	unclassified non-coding RNA gene	Chr9:103351435-103351700 (+)
CBA/J	ENSMUSG00210044094	unclassified non-coding RNA gene	Chr9:103433450-103433715 (+)
DBA/2J	ENSMUSG00185046265	unclassified non-coding RNA gene	Chr9:103597991-103598256 (+)
FVB/NJ	ENSMUSG00205050773	unclassified non-coding RNA gene	Chr9:103602055-103602320 (+)
JF1/MsJ	ENSUMUG00000055567	unclassified non-coding RNA gene	Chr9:103421186-103421451 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190051469	unclassified non-coding RNA gene	Chr9:103233404-103233669 (+)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010043443	unclassified non-coding RNA gene	Chr9:103367427-103367692 (+)
SPRET/EiJ	ENSMSPG00010048161	unclassified non-coding RNA gene	Chr9:105225911-105226176 (+)
WSB/EiJ	ENSIUOG00005048880	unclassified non-coding RNA gene	Chr9:102673943-102674208 (+)

Homology

• Gene Tree
  Gm54823
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076513 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076513	Ensembl Gene Model | MGI Sequence Detail	266	C57BL/6J
transcript	ENSMUST00020183174	Ensembl | MGI Sequence Detail	266	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;