Gm54817 Gene Detail

Summary

• Symbol
  Gm54817
• Name
  predicted gene, 54817

• Feature Type
  miRNA gene
• IDs
  MGI:6846111
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:67789168-67789262 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  90 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846111	miRNA gene	Chr5:67789168-67789262 (-)
129S1/SvImJ	ENSMUSG00200036538	miRNA gene	Chr5:63414454-63414552 (-)
A/J	ENSMUSG00195035920	miRNA gene	Chr5:62768811-62768909 (-)
AKR/J	ENSMUSG00220004396	miRNA gene	Chr5:62906668-62906766 (-)
BALB/cJ	ENSMUSG00180023476	miRNA gene	Chr5:62555131-62555237 (-)
C3H/HeJ	ENSMUSG00175028929	miRNA gene	Chr5:64587482-64587596 (-)
C57BL/6NJ	ENSMUSG00215005904	miRNA gene	Chr5:63336618-63336712 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031894	miRNA gene	Chr5:62498633-62498730 (-)
CBA/J	ENSMUSG00210023445	miRNA gene	Chr5:63500332-63500446 (-)
DBA/2J	ENSMUSG00185005875	miRNA gene	Chr5:65357885-65357999 (-)
FVB/NJ	ENSMUSG00205033854	miRNA gene	Chr5:62307007-62307107 (-)
JF1/MsJ	ENSUMUG00000024055	miRNA gene	Chr5:69868258-69868353 (-)
LP/J	ENSMUSG00230009832	miRNA gene	Chr5:70026976-70027074 (-)
NOD/ShiLtJ	ENSMUSG00190004635	miRNA gene	Chr5:62493412-62493510 (-)
NZO/HlLtJ	ENSMUSG00225011108	miRNA gene	Chr5:75131672-75131768 (+)
PWK/PhJ	ENSLUMG00010014809	miRNA gene	Chr5:62478567-62478662 (-)
SPRET/EiJ	ENSMSPG00010036856	miRNA gene	Chr5:64267916-64268005 (-)
WSB/EiJ	ENSIUOG00005019468	miRNA gene	Chr5:65463806-65463906 (-)

Homology

• Gene Tree
  Gm54817
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002076306 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076306	Ensembl Gene Model | MGI Sequence Detail	95	C57BL/6J
transcript	ENSMUST00020183351	Ensembl | MGI Sequence Detail	95	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;