Gm54816 Gene Detail

Summary

• Symbol
  Gm54816
• Name
  predicted gene, 54816

• Feature Type
  snRNA gene
• IDs
  MGI:6846109
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr10:64140416-64140523 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846109	snRNA gene	Chr10:64140416-64140523 (-)
129S1/SvImJ	ENSMUSG00200029925	snRNA gene	Chr10:60828333-60828440 (-)
A/J	ENSMUSG00195028383	snRNA gene	Chr10:61125206-61125313 (-)
AKR/J	ENSMUSG00220042992	snRNA gene	Chr10:60830145-60830252 (-)
BALB/cJ	ENSMUSG00180029086	snRNA gene	Chr10:61164389-61164496 (-)
C3H/HeJ	ENSMUSG00175027303	snRNA gene	Chr10:61021768-61021875 (-)
C57BL/6NJ	ENSMUSG00215032269	snRNA gene	Chr10:60769949-60770056 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005030576	snRNA gene	Chr10:60788775-60788882 (-)
CBA/J	ENSMUSG00210037928	snRNA gene	Chr10:60905298-60905405 (-)
DBA/2J	ENSMUSG00185043425	snRNA gene	Chr10:61241671-61241778 (-)
FVB/NJ	ENSMUSG00205038316	snRNA gene	Chr10:60940503-60940610 (-)
JF1/MsJ	ENSUMUG00000025884	snRNA gene	Chr10:62459508-62459615 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190041196	snRNA gene	Chr10:61228277-61228384 (-)
NZO/HlLtJ	ENSMUSG00225045285	snRNA gene	Chr10:67325516-67325623 (-)
PWK/PhJ	ENSLUMG00010024661	snRNA gene	Chr10:60858342-60858437 (-)
SPRET/EiJ	ENSMSPG00010024892	snRNA gene	Chr10:62402187-62402294 (-)
WSB/EiJ	ENSIUOG00005042552	snRNA gene	Chr10:60815068-60815175 (-)

Homology

• Gene Tree
  Gm54816
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075335 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075335	Ensembl Gene Model | MGI Sequence Detail	108	C57BL/6J
transcript	ENSMUST00020182579	Ensembl | MGI Sequence Detail	108	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;