Gm54814 Gene Detail

Summary

• Symbol
  Gm54814
• Name
  predicted gene, 54814

• Feature Type
  miRNA gene
• IDs
  MGI:6846105
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:72176984-72177092 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  111 from dbSNP Build 142
• Strain Annotations
  26

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846105	miRNA gene	Chr12:72176984-72177092 (-)
129S1/SvImJ	ENSMUSG00200032267	miRNA gene	Chr12:64086747-64086855 (-)
A/J	ENSMUSG00195014658	miRNA gene	Chr12:66790796-66790904 (-)
AKR/J	ENSMUSG00220015302	miRNA gene	Chr12:64596581-64596689 (-)
BALB/cJ	ENSMUSG00180034933	miRNA gene	Chr12:65789836-65789944 (-)
C3H/HeJ	ENSMUSG00175029103	miRNA gene	Chr12:68916668-68916776 (-)
C57BL/6NJ	ENSMUSG00215031393	miRNA gene	Chr12:65167858-65167966 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005036071	miRNA gene	Chr12:65096301-65096409 (-)
CBA/J	ENSMUSG00210031154	miRNA gene	Chr12:65353980-65354088 (-)
DBA/2J	ENSMUSG00185004901	miRNA gene	Chr12:67257035-67257143 (-)
FVB/NJ	ENSMUSG00205037908	miRNA gene	Chr12:64986774-64986882 (-)
JF1/MsJ	ENSUMUG00000027974	miRNA gene	Chr18:16032911-16033019 (-)
JF1/MsJ	ENSUMUG00000029926	miRNA gene	Chr18:26120302-26120407 (+)
JF1/MsJ	ENSUMUG00000023596	miRNA gene	Chr12:71201385-71201493 (-)
LP/J	ENSMUSG00230022649	miRNA gene	Chr12:74222777-74222885 (-)
NOD/ShiLtJ	ENSMUSG00190013405	miRNA gene	Chr12:64420063-64420171 (-)
NZO/HlLtJ	ENSMUSG00225035271	miRNA gene	Chr12:24336674-24336780 (-)
NZO/HlLtJ	ENSMUSG00225038311	miRNA gene	Chr12:76274231-76274339 (-)
PWK/PhJ	ENSLUMG00010018981	miRNA gene	Chr4:95241835-95241942 (-)
PWK/PhJ	ENSLUMG00010016237	miRNA gene	Chr18:16243728-16243836 (-)
PWK/PhJ	ENSLUMG00010032988	miRNA gene	Chr12:65267052-65267160 (-)
SPRET/EiJ	ENSMSPG00010030518	miRNA gene	Chr1:15822666-15822774 (+)
SPRET/EiJ	ENSMSPG00010050609	miRNA gene	Chr7:3989462-3989570 (-)
SPRET/EiJ	ENSMSPG00010028570	miRNA gene	Chr12:66970189-66970297 (-)
SPRET/EiJ	ENSMSPG00010006665	miRNA gene	Chr8:98173277-98173384 (+)
WSB/EiJ	ENSIUOG00005012855	miRNA gene	Chr12:65044783-65044891 (-)

Homology

• Gene Tree
  Gm54814
  

Sequences &
Gene Models

• All Sequences
  28

• Ensembl
  ENSMUSG00002076562 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076562	Ensembl Gene Model | MGI Sequence Detail	109	C57BL/6J
transcript	ENSMUST00020182168	Ensembl | MGI Sequence Detail	109	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;