Gm54813 Gene Detail

Summary

• Symbol
  Gm54813
• Name
  predicted gene, 54813

• Feature Type
  rRNA gene
• IDs
  MGI:6846103
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:53118657-53118768 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846103	rRNA gene	Chr13:53118657-53118768 (-)
129S1/SvImJ	ENSMUSG00200036760	rRNA gene	Chr13:49979540-49979651 (-)
A/J	ENSMUSG00195030343	rRNA gene	Chr13:49452401-49452512 (-)
AKR/J	ENSMUSG00220009979	rRNA gene	Chr13:49003208-49003319 (-)
BALB/cJ	ENSMUSG00180009263	rRNA gene	Chr13:49702050-49702161 (-)
C3H/HeJ	ENSMUSG00175029577	rRNA gene	Chr13:49484963-49485074 (-)
C57BL/6NJ	ENSMUSG00215007013	rRNA gene	Chr13:49518948-49519059 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031397	rRNA gene	Chr13:49890322-49890433 (-)
CBA/J	ENSMUSG00210028492	rRNA gene	Chr13:49695204-49695315 (-)
DBA/2J	ENSMUSG00185018211	rRNA gene	Chr13:50542282-50542393 (-)
FVB/NJ	ENSMUSG00205013104	rRNA gene	Chr13:49348221-49348332 (-)
JF1/MsJ	ENSUMUG00000017819	rRNA gene	Chr13:49931244-49931355 (-)
LP/J	ENSMUSG00230029757	rRNA gene	Chr13:59862282-59862393 (-)
NOD/ShiLtJ	ENSMUSG00190012271	rRNA gene	Chr13:49579797-49579908 (-)
NZO/HlLtJ	ENSMUSG00225035606	rRNA gene	Chr13:53612712-53612823 (-)
PWK/PhJ	ENSLUMG00010022203	rRNA gene	Chr13:48808367-48808478 (-)
SPRET/EiJ	ENSMSPG00010033821	rRNA gene	Chr13:49222808-49222919 (-)
WSB/EiJ	ENSIUOG00005027965	rRNA gene	Chr13:48960012-48960123 (-)

Homology

• Gene Tree
  Gm54813
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075804 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075804	Ensembl Gene Model | MGI Sequence Detail	112	C57BL/6J
transcript	ENSMUST00020182721	Ensembl | MGI Sequence Detail	112	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;