Gm54804 Gene Detail

Summary

• Symbol
  Gm54804
• Name
  predicted gene, 54804

• Feature Type
  miRNA gene
• IDs
  MGI:6846085
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:38612258-38612363 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846085	miRNA gene	Chr3:38612258-38612363 (-)
129S1/SvImJ	ENSMUSG00200006290	miRNA gene	Chr3:35356179-35356284 (-)
A/J	ENSMUSG00195001527	miRNA gene	Chr3:35329632-35329737 (-)
AKR/J	ENSMUSG00220000677	miRNA gene	Chr3:35421553-35421658 (-)
BALB/cJ	ENSMUSG00180002767	miRNA gene	Chr3:35468251-35468356 (-)
C3H/HeJ	ENSMUSG00175003555	miRNA gene	Chr3:35373589-35373694 (-)
C57BL/6NJ	ENSMUSG00215001567	miRNA gene	Chr3:35742341-35742446 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005001194	miRNA gene	Chr3:35197787-35197892 (-)
CBA/J	ENSMUSG00210001693	miRNA gene	Chr3:35427926-35428031 (-)
DBA/2J	ENSMUSG00185001763	miRNA gene	Chr3:35635691-35635796 (-)
FVB/NJ	ENSMUSG00205000728	miRNA gene	Chr3:34788285-34788390 (-)
JF1/MsJ	ENSUMUG00000001114	miRNA gene	Chr3:35162180-35162285 (-)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190002118	miRNA gene	Chr3:35678147-35678252 (-)
NZO/HlLtJ	no annotation
PWK/PhJ	ENSLUMG00010000837	miRNA gene	Chr3:35196431-35196536 (-)
SPRET/EiJ	ENSMSPG00010000724	miRNA gene	Chr3:35613386-35613491 (-)
WSB/EiJ	ENSIUOG00005014715	miRNA gene	Chr3:35651606-35651711 (-)

Homology

• Gene Tree
  Gm54804
  

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00002076557 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002076557	Ensembl Gene Model | MGI Sequence Detail	106	C57BL/6J
transcript	ENSMUST00020183664	Ensembl | MGI Sequence Detail	106	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;