Gm54802 Gene Detail

Summary

• Symbol
  Gm54802
• Name
  predicted gene, 54802

• Feature Type
  rRNA gene
• IDs
  MGI:6846081
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:7237306-7237426 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846081	rRNA gene	Chr19:7237306-7237426 (+)
129S1/SvImJ	ENSMUSG00200052800	rRNA gene	Chr19:3962846-3962966 (+)
A/J	ENSMUSG00195053216	rRNA gene	Chr19:4364762-4364882 (+)
AKR/J	ENSMUSG00220050411	rRNA gene	Chr19:4134148-4134268 (+)
BALB/cJ	ENSMUSG00180051738	rRNA gene	Chr19:4728320-4728440 (+)
C3H/HeJ	ENSMUSG00175015575	rRNA gene	Chr19:3984763-3984883 (+)
C57BL/6NJ	ENSMUSG00215047965	rRNA gene	Chr19:4203282-4203402 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005043640	rRNA gene	Chr19:4104852-4104972 (+)
CBA/J	ENSMUSG00210050654	rRNA gene	Chr19:3987681-3987801 (+)
DBA/2J	ENSMUSG00185052370	rRNA gene	Chr19:4364156-4364276 (+)
FVB/NJ	ENSMUSG00205053421	rRNA gene	Chr19:4362274-4362394 (+)
JF1/MsJ	ENSUMUG00000056684	rRNA gene	Chr19:4324480-4324600 (+)
LP/J	ENSMUSG00230054203	rRNA gene	Chr19:5289566-5289686 (+)
NOD/ShiLtJ	ENSMUSG00190053418	rRNA gene	Chr19:3896027-3896147 (+)
NZO/HlLtJ	ENSMUSG00225027111	rRNA gene	Chr19:8998389-8998509 (+)
PWK/PhJ	ENSLUMG00010008479	rRNA gene	Chr19:4088218-4088338 (+)
SPRET/EiJ	ENSMSPG00010050606	rRNA gene	Chr19:4085572-4085692 (+)
WSB/EiJ	ENSIUOG00005051781	rRNA gene	Chr19:4001903-4002023 (+)

Homology

• Gene Tree
  Gm54802
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075307 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075307	Ensembl Gene Model | MGI Sequence Detail	121	C57BL/6J
transcript	ENSMUST00020181906	Ensembl | MGI Sequence Detail	121	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;