Gm54801 Gene Detail

Summary

• Symbol
  Gm54801
• Name
  predicted gene, 54801

• Feature Type
  rRNA gene
• IDs
  MGI:6846079
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr16:97300116-97300222 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  65 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846079	rRNA gene	Chr16:97300116-97300222 (-)
129S1/SvImJ	ENSMUSG00200016837	rRNA gene	Chr16:94241761-94241867 (-)
A/J	ENSMUSG00195016691	rRNA gene	Chr16:94000326-94000432 (-)
AKR/J	ENSMUSG00220009689	rRNA gene	Chr16:94254419-94254527 (-)
BALB/cJ	ENSMUSG00180001253	rRNA gene	Chr16:94074426-94074532 (-)
C3H/HeJ	ENSMUSG00175002923	rRNA gene	Chr16:94411121-94411227 (-)
C57BL/6NJ	ENSMUSG00215019866	rRNA gene	Chr16:94207765-94207871 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005012748	rRNA gene	Chr16:93795944-93796050 (-)
CBA/J	ENSMUSG00210017998	rRNA gene	Chr16:94309497-94309605 (-)
DBA/2J	ENSMUSG00185003608	rRNA gene	Chr16:94256668-94256774 (-)
FVB/NJ	ENSMUSG00205015736	rRNA gene	Chr16:94033245-94033351 (-)
JF1/MsJ	ENSUMUG00000019014	rRNA gene	Chr16:94386148-94386254 (-)
LP/J	ENSMUSG00230028419	rRNA gene	Chr16:96788198-96788304 (-)
NOD/ShiLtJ	ENSMUSG00190003916	rRNA gene	Chr16:94220542-94220648 (-)
NZO/HlLtJ	ENSMUSG00225031754	rRNA gene	Chr16:99897371-99897477 (-)
PWK/PhJ	ENSLUMG00010014963	rRNA gene	Chr16:94038573-94038679 (-)
SPRET/EiJ	ENSMSPG00010021016	rRNA gene	Chr16:95162582-95162688 (-)
WSB/EiJ	ENSIUOG00005014168	rRNA gene	Chr16:94177962-94178068 (-)

Homology

• Gene Tree
  Gm54801
  

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00002075695 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075695	Ensembl Gene Model | MGI Sequence Detail	107	C57BL/6J
transcript	ENSMUST00020182620	Ensembl | MGI Sequence Detail	107	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;