Gm54800 Gene Detail

Summary

• Symbol
  Gm54800
• Name
  predicted gene, 54800

• Feature Type
  miRNA gene
• IDs
  MGI:6846077
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr12:37051838-37051938 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  116 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846077	miRNA gene	Chr12:37051838-37051938 (-)
129S1/SvImJ	ENSMUSG00200015892	miRNA gene	Chr12:28909474-28909574 (-)
A/J	ENSMUSG00195019056	miRNA gene	Chr12:31615477-31615577 (-)
AKR/J	ENSMUSG00220031585	miRNA gene	Chr12:29564388-29564488 (-)
BALB/cJ	ENSMUSG00180003629	miRNA gene	Chr12:30607021-30607121 (-)
C3H/HeJ	ENSMUSG00175017652	miRNA gene	Chr12:33660582-33660682 (-)
C57BL/6NJ	ENSMUSG00215020305	miRNA gene	Chr12:29982522-29982622 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010363	miRNA gene	Chr12:30376178-30376278 (-)
CBA/J	ENSMUSG00210008803	miRNA gene	Chr12:30139639-30139739 (-)
DBA/2J	ENSMUSG00185020100	miRNA gene	Chr12:32162387-32162487 (-)
FVB/NJ	ENSMUSG00205006349	miRNA gene	Chr12:30190494-30190594 (-)
JF1/MsJ	ENSUMUG00000011005	miRNA gene	Chr12:36301892-36301992 (-)
LP/J	ENSMUSG00230024459	miRNA gene	Chr12:39082513-39082613 (-)
NOD/ShiLtJ	ENSMUSG00190018801	miRNA gene	Chr12:29099650-29099750 (-)
NZO/HlLtJ	ENSMUSG00225031809	miRNA gene	Chr12:41304446-41304546 (-)
PWK/PhJ	ENSLUMG00010012769	miRNA gene	Chr12:30502420-30502520 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005021114	miRNA gene	Chr12:29841914-29842014 (-)

Homology

• Gene Tree
  Gm54800
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002074952 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002074952	Ensembl Gene Model | MGI Sequence Detail	101	C57BL/6J
transcript	ENSMUST00020182070	Ensembl | MGI Sequence Detail	101	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;