Gm54793 Gene Detail

Summary

• Symbol
  Gm54793
• Name
  predicted gene, 54793

• Feature Type
  miRNA gene
• IDs
  MGI:6846063
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr14:8691612-8691691 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_6846063	miRNA gene	Chr14:8691612-8691691 (+)
129S1/SvImJ	ENSMUSG00200025741	miRNA gene	Chr14:5338106-5338185 (+)
A/J	ENSMUSG00195031385	miRNA gene	Chr14:6162192-6162271 (+)
AKR/J	ENSMUSG00220023634	miRNA gene	Chr14:5322315-5322394 (+)
BALB/cJ	ENSMUSG00180025554	miRNA gene	Chr14:5487287-5487366 (+)
C3H/HeJ	ENSMUSG00175009654	miRNA gene	Chr14:5482295-5482374 (+)
C57BL/6NJ	ENSMUSG00215023130	miRNA gene	Chr14:5734630-5734709 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005031911	miRNA gene	Chr14:5396817-5396896 (+)
CBA/J	ENSMUSG00210037402	miRNA gene	Chr14:5704602-5704681 (+)
DBA/2J	ENSMUSG00185037926	miRNA gene	Chr14:5710486-5710565 (+)
FVB/NJ	ENSMUSG00205027544	miRNA gene	Chr14:5697843-5697922 (+)
JF1/MsJ	ENSUMUG00000028522	miRNA gene	Chr14:5718800-5718879 (+)
LP/J	no annotation
NOD/ShiLtJ	ENSMUSG00190035315	miRNA gene	Chr14:5726664-5726743 (+)
NZO/HlLtJ	ENSMUSG00225037520	miRNA gene	Chr14:6127054-6127133 (+)
PWK/PhJ	ENSLUMG00010035196	miRNA gene	Chr14:27045859-27045938 (+)
SPRET/EiJ	ENSMSPG00010002642	miRNA gene	Chr14:6018564-6018643 (+)
WSB/EiJ	ENSIUOG00005025846	miRNA gene	Chr14:5555654-5555733 (+)

Homology

• Gene Tree
  Gm54793
  

Sequences &
Gene Models

• All Sequences
  19

• Ensembl
  ENSMUSG00002075708 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00002075708	Ensembl Gene Model | MGI Sequence Detail	80	C57BL/6J
transcript	ENSMUST00020181891	Ensembl | MGI Sequence Detail	80	Not Applicable

References

• Summaries
  All 1
• Earliest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;